Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.32■□□□□ 0.52
SNX21Q969T3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
SNX21Q969T3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX21Q969T3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX21Q969T3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX21Q969T3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX21Q969T3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SNX21Q969T3 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.32■□□□□ 0.52
SNX21Q969T3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SNX21Q969T3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.32■□□□□ 0.52
SNX21Q969T3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.32■□□□□ 0.52
SNX21Q969T3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.32■□□□□ 0.52
SNX21Q969T3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX21Q969T3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.32■□□□□ 0.52
SNX21Q969T3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX21Q969T3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.32■□□□□ 0.52
SNX21Q969T3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.32■□□□□ 0.52
SNX21Q969T3 AC018529.1-201ENST00000613063 361 ntBASIC18.32■□□□□ 0.52
SNX21Q969T3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX21Q969T3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC18.32■□□□□ 0.52
SNX21Q969T3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC18.32■□□□□ 0.52
SNX21Q969T3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.32■□□□□ 0.52
SNX21Q969T3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX21Q969T3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNX21Q969T3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC18.32■□□□□ 0.52
SNX21Q969T3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNX21Q969T3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.32■□□□□ 0.52
SNX21Q969T3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SNX21Q969T3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNX21Q969T3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX21Q969T3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SNX21Q969T3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX21Q969T3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX21Q969T3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX21Q969T3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SNX21Q969T3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
SNX21Q969T3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX21Q969T3 MBLAC2-202ENST00000514906 1936 ntBASIC18.31■□□□□ 0.52
SNX21Q969T3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX21Q969T3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SNX21Q969T3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX21Q969T3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX21Q969T3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX21Q969T3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX21Q969T3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX21Q969T3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX21Q969T3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX21Q969T3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX21Q969T3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX21Q969T3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SNX21Q969T3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX21Q969T3 ACTG1P14-201ENST00000446382 1122 ntBASIC18.31■□□□□ 0.52
SNX21Q969T3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX21Q969T3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX21Q969T3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX21Q969T3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX21Q969T3 ALG1L8P-201ENST00000533887 760 ntBASIC18.31■□□□□ 0.52
SNX21Q969T3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SNX21Q969T3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX21Q969T3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX21Q969T3 AC055811.4-201ENST00000624039 1754 ntBASIC18.31■□□□□ 0.52
SNX21Q969T3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX21Q969T3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX21Q969T3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX21Q969T3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC18.31■□□□□ 0.52
SNX21Q969T3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX21Q969T3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX21Q969T3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SNX21Q969T3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.31■□□□□ 0.52
SNX21Q969T3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX21Q969T3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SNX21Q969T3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX21Q969T3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX21Q969T3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC18.3■□□□□ 0.52
SNX21Q969T3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX21Q969T3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX21Q969T3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX21Q969T3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX21Q969T3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX21Q969T3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX21Q969T3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX21Q969T3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX21Q969T3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SNX21Q969T3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX21Q969T3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
SNX21Q969T3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX21Q969T3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX21Q969T3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
SNX21Q969T3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX21Q969T3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SNX21Q969T3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SNX21Q969T3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX21Q969T3 MED15P5-201ENST00000423150 992 ntBASIC18.3■□□□□ 0.52
SNX21Q969T3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.3■□□□□ 0.52
SNX21Q969T3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX21Q969T3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.3■□□□□ 0.52
SNX21Q969T3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SNX21Q969T3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX21Q969T3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX21Q969T3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms