Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 C2orf27AP3-201ENST00000434123 579 ntBASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 AC079316.1-201ENST00000548397 411 ntBASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 AL354718.3-201ENST00000616414 581 ntBASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 MIR6869-201ENST00000619434 62 ntBASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 CR382287.1-201ENST00000623954 586 ntBASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0A1Q93050 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATP6V0A1Q93050 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.27■□□□□ 0.35
ATP6V0A1Q93050 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATP6V0A1Q93050 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.27■□□□□ 0.35
ATP6V0A1Q93050 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
ATP6V0A1Q93050 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ATP6V0A1Q93050 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
ATP6V0A1Q93050 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
ATP6V0A1Q93050 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.27■□□□□ 0.35
ATP6V0A1Q93050 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 AC068587.6-202ENST00000641839 5619 ntBASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 AC090616.6-203ENST00000579186 1945 ntBASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 YBX1P6-201ENST00000442962 1002 ntBASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 KRT90P-201ENST00000549264 1064 ntBASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 GPR182-203ENST00000622922 591 ntBASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 BX539320.1-201ENST00000623759 877 ntBASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 RHOXF1P1-202ENST00000635473 501 ntBASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0A1Q93050 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 AC026954.1-201ENST00000429771 1293 ntBASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 GNRHR2-203ENST00000581100 1187 ntBASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 AC010328.2-201ENST00000597698 1111 ntBASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms