Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 RNU1-114P-201ENST00000365297 166 ntBASIC18.15■□□□□ 0.5
STAG1Q8WVM7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 TDH-203ENST00000531764 1110 ntBASIC18.15■□□□□ 0.5
STAG1Q8WVM7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 AL512343.1-201ENST00000605837 169 ntBASIC18.15■□□□□ 0.5
STAG1Q8WVM7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
STAG1Q8WVM7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.14■□□□□ 0.5
STAG1Q8WVM7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.14■□□□□ 0.5
STAG1Q8WVM7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
STAG1Q8WVM7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 AC006486.2-201ENST00000624246 2199 ntBASIC18.14■□□□□ 0.49
STAG1Q8WVM7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.14■□□□□ 0.49
STAG1Q8WVM7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 AC012441.1-201ENST00000446669 685 ntBASIC18.14■□□□□ 0.49
STAG1Q8WVM7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 AC068587.3-201ENST00000526613 355 ntBASIC18.14■□□□□ 0.49
STAG1Q8WVM7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
STAG1Q8WVM7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
STAG1Q8WVM7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.13■□□□□ 0.49
STAG1Q8WVM7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
STAG1Q8WVM7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
STAG1Q8WVM7 AC104640.1-201ENST00000562617 2109 ntBASIC18.13■□□□□ 0.49
STAG1Q8WVM7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
STAG1Q8WVM7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.13■□□□□ 0.49
STAG1Q8WVM7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
STAG1Q8WVM7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
STAG1Q8WVM7 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.13■□□□□ 0.49
STAG1Q8WVM7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
STAG1Q8WVM7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.13■□□□□ 0.49
STAG1Q8WVM7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
STAG1Q8WVM7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
STAG1Q8WVM7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
STAG1Q8WVM7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.13■□□□□ 0.49
STAG1Q8WVM7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
STAG1Q8WVM7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms