Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 AC093813.1-201ENST00000605066 256 ntBASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SHROOM3Q8TF72 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 KRT8P22-201ENST00000562317 1415 ntBASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 AL442647.2-201ENST00000429864 857 ntBASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 AL353779.1-201ENST00000434793 351 ntBASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 AP005482.1-201ENST00000563722 1273 ntBASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHROOM3Q8TF72 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 SOCS2P1-201ENST00000417727 557 ntBASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 AC134915.1-201ENST00000426461 574 ntBASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 AC106886.1-201ENST00000568660 600 ntBASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 AL157414.3-201ENST00000624276 1954 ntBASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHROOM3Q8TF72 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 AL162726.2-201ENST00000438986 1017 ntBASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms