Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 AC011467.4-201ENST00000594891 528 ntBASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC15.52■□□□□ 0.07
RAB3IL1Q8TBN0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAB3IL1Q8TBN0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB3IL1Q8TBN0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
RAB3IL1Q8TBN0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.52■□□□□ 0.07
RAB3IL1Q8TBN0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAB3IL1Q8TBN0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.52■□□□□ 0.07
RAB3IL1Q8TBN0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.52■□□□□ 0.07
RAB3IL1Q8TBN0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB3IL1Q8TBN0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
RAB3IL1Q8TBN0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.52■□□□□ 0.07
RAB3IL1Q8TBN0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 AC097359.3-201ENST00000603982 1210 ntBASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 FAM215A-202ENST00000632077 792 ntBASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB3IL1Q8TBN0 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms