Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 AC069224.1-201ENST00000566372 1715 ntBASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 FAM8A2P-201ENST00000528813 1142 ntBASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 RHOXF1P1-202ENST00000635473 501 ntBASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHKBP1Q8TBC3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 BRWD1P1-201ENST00000401091 371 ntBASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 C2orf27AP3-201ENST00000434123 579 ntBASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 AL354718.3-201ENST00000616414 581 ntBASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 GPR182-203ENST00000622922 591 ntBASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 CR382287.1-201ENST00000623954 586 ntBASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHKBP1Q8TBC3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms