Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 REXO1L2P-201ENST00000425429 2069 ntBASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 RN7SL618P-201ENST00000477850 296 ntBASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 AC125807.1-201ENST00000483097 614 ntBASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 AC067863.1-201ENST00000494933 530 ntBASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 AC069120.2-201ENST00000524091 540 ntBASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 AL645728.2-202ENST00000641679 227 ntBASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LSMEM1Q8N8F7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 WASH3P-207ENST00000560956 1394 ntBASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 AC087499.5-201ENST00000452760 1342 ntBASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 SDHAP3-202ENST00000515467 728 ntBASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 AC004449.1-201ENST00000564240 433 ntBASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LSMEM1Q8N8F7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms