Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 BTBD7P1-201ENST00000447253 1453 ntBASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 AC138969.3-201ENST00000546612 1459 ntBASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 AC138932.2-201ENST00000548268 1459 ntBASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 AC126755.4-201ENST00000549796 1459 ntBASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 AC135586.1-201ENST00000539323 574 ntBASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 AC008738.7-201ENST00000609744 511 ntBASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 AL121723.1-201ENST00000445194 1519 ntBASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 AC004840.1-201ENST00000636359 365 ntBASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 AC103702.1-201ENST00000548801 2630 ntBASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC116Q8IYX3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms