Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
UBR1Q8IWV7 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC21.32■■□□□ 1
UBR1Q8IWV7 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC21.32■■□□□ 1
UBR1Q8IWV7 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBR1Q8IWV7 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC21.32■■□□□ 1
UBR1Q8IWV7 C2orf69P1-201ENST00000563532 1093 ntBASIC21.32■■□□□ 1
UBR1Q8IWV7 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC21.32■■□□□ 1
UBR1Q8IWV7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
UBR1Q8IWV7 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
UBR1Q8IWV7 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBR1Q8IWV7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
UBR1Q8IWV7 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBR1Q8IWV7 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
UBR1Q8IWV7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.31■■□□□ 1
UBR1Q8IWV7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC21.31■■□□□ 1
UBR1Q8IWV7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
UBR1Q8IWV7 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBR1Q8IWV7 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC21.31■■□□□ 1
UBR1Q8IWV7 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
UBR1Q8IWV7 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC21.31■■□□□ 1
UBR1Q8IWV7 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
UBR1Q8IWV7 MIR6769A-201ENST00000617340 73 ntBASIC21.31■■□□□ 1
UBR1Q8IWV7 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC21.31■■□□□ 1
UBR1Q8IWV7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBR1Q8IWV7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC21.31■■□□□ 1
UBR1Q8IWV7 AC024909.3-201ENST00000611513 2257 ntBASIC21.31■■□□□ 1
UBR1Q8IWV7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBR1Q8IWV7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBR1Q8IWV7 PCDHA12-202ENST00000613593 2588 ntBASIC21.31■■□□□ 1
UBR1Q8IWV7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
UBR1Q8IWV7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC21.31■■□□□ 1
UBR1Q8IWV7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBR1Q8IWV7 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBR1Q8IWV7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
UBR1Q8IWV7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBR1Q8IWV7 API5-202ENST00000420461 2009 ntTSL 2 BASIC21.31■■□□□ 1
UBR1Q8IWV7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
UBR1Q8IWV7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBR1Q8IWV7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
UBR1Q8IWV7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBR1Q8IWV7 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC21.3■■□□□ 1
UBR1Q8IWV7 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBR1Q8IWV7 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC21.3■■□□□ 1
UBR1Q8IWV7 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC21.3■■□□□ 1
UBR1Q8IWV7 ALG1L13P-202ENST00000519320 584 ntBASIC21.3■■□□□ 1
UBR1Q8IWV7 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC21.3■■□□□ 1
UBR1Q8IWV7 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC21.3■■□□□ 1
UBR1Q8IWV7 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBR1Q8IWV7 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC21.3■■□□□ 1
UBR1Q8IWV7 AL118516.1-201ENST00000564152 670 ntBASIC21.3■■□□□ 1
UBR1Q8IWV7 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC21.3■■□□□ 1
UBR1Q8IWV7 SIGLEC18P-201ENST00000602271 909 ntBASIC21.3■■□□□ 1
UBR1Q8IWV7 FO393412.1-201ENST00000619841 382 ntBASIC21.3■■□□□ 1
UBR1Q8IWV7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBR1Q8IWV7 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC21.3■■□□□ 1
UBR1Q8IWV7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBR1Q8IWV7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.3■■□□□ 1
UBR1Q8IWV7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
UBR1Q8IWV7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.3■■□□□ 1
UBR1Q8IWV7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
UBR1Q8IWV7 ZBED1P1-201ENST00000502364 1930 ntBASIC21.3■■□□□ 1
UBR1Q8IWV7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
UBR1Q8IWV7 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC21.3■■□□□ 1
UBR1Q8IWV7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC21.3■■□□□ 1
UBR1Q8IWV7 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC21.29■■□□□ 1
UBR1Q8IWV7 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBR1Q8IWV7 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBR1Q8IWV7 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC21.29■■□□□ 1
UBR1Q8IWV7 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC21.29■■□□□ 1
UBR1Q8IWV7 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBR1Q8IWV7 ALG1L6P-201ENST00000515248 758 ntBASIC21.29■■□□□ 1
UBR1Q8IWV7 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC21.29■■□□□ 1
UBR1Q8IWV7 AC138466.5-201ENST00000624002 808 ntBASIC21.29■■□□□ 1
UBR1Q8IWV7 AC106820.2-201ENST00000563775 3264 ntBASIC21.29■■□□□ 1
UBR1Q8IWV7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBR1Q8IWV7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBR1Q8IWV7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBR1Q8IWV7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBR1Q8IWV7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC21.29■■□□□ 1
UBR1Q8IWV7 AL603832.2-201ENST00000566195 2125 ntBASIC21.29■■□□□ 1
UBR1Q8IWV7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC21.29■■□□□ 1
UBR1Q8IWV7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
UBR1Q8IWV7 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
UBR1Q8IWV7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
UBR1Q8IWV7 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBR1Q8IWV7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBR1Q8IWV7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC21.29■■□□□ 1
UBR1Q8IWV7 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBR1Q8IWV7 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC21.29■■□□□ 1
UBR1Q8IWV7 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBR1Q8IWV7 AC004837.1-201ENST00000446267 564 ntBASIC21.29■■□□□ 1
UBR1Q8IWV7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC21.29■■□□□ 1
UBR1Q8IWV7 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC21.29■■□□□ 1
UBR1Q8IWV7 AC138466.4-201ENST00000623965 852 ntBASIC21.29■■□□□ 1
UBR1Q8IWV7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBR1Q8IWV7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
UBR1Q8IWV7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC21.29■■□□□ 1
UBR1Q8IWV7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC21.29■■□□□ 1
UBR1Q8IWV7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.28■■□□□ 1
UBR1Q8IWV7 AL359258.3-201ENST00000622910 2331 ntBASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms