Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALYREFQ86V81 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.3■□□□□ 0.2
ALYREFQ86V81 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.3■□□□□ 0.2
ALYREFQ86V81 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ALYREFQ86V81 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ALYREFQ86V81 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.3■□□□□ 0.2
ALYREFQ86V81 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ALYREFQ86V81 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALYREFQ86V81 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALYREFQ86V81 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALYREFQ86V81 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ALYREFQ86V81 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ALYREFQ86V81 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALYREFQ86V81 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALYREFQ86V81 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ALYREFQ86V81 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALYREFQ86V81 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ALYREFQ86V81 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.3■□□□□ 0.2
ALYREFQ86V81 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ALYREFQ86V81 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALYREFQ86V81 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALYREFQ86V81 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ALYREFQ86V81 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ALYREFQ86V81 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ALYREFQ86V81 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ALYREFQ86V81 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
ALYREFQ86V81 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.29■□□□□ 0.2
ALYREFQ86V81 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ALYREFQ86V81 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.29■□□□□ 0.2
ALYREFQ86V81 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.29■□□□□ 0.2
ALYREFQ86V81 IQSEC3P1-201ENST00000538799 536 ntBASIC16.29■□□□□ 0.2
ALYREFQ86V81 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.29■□□□□ 0.2
ALYREFQ86V81 MIR5189-201ENST00000577370 114 ntBASIC16.29■□□□□ 0.2
ALYREFQ86V81 AC097724.1-201ENST00000609581 426 ntBASIC16.29■□□□□ 0.2
ALYREFQ86V81 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.29■□□□□ 0.2
ALYREFQ86V81 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.29■□□□□ 0.2
ALYREFQ86V81 AL008638.5-201ENST00000623814 1298 ntBASIC16.29■□□□□ 0.2
ALYREFQ86V81 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 AC099063.4-201ENST00000641099 1602 ntBASIC16.29■□□□□ 0.2
ALYREFQ86V81 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.29■□□□□ 0.2
ALYREFQ86V81 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.29■□□□□ 0.2
ALYREFQ86V81 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.29■□□□□ 0.2
ALYREFQ86V81 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.29■□□□□ 0.2
ALYREFQ86V81 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ALYREFQ86V81 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.29■□□□□ 0.2
ALYREFQ86V81 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ALYREFQ86V81 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ALYREFQ86V81 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ALYREFQ86V81 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ALYREFQ86V81 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ALYREFQ86V81 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ALYREFQ86V81 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ALYREFQ86V81 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ALYREFQ86V81 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 BX284668.4-201ENST00000453917 508 ntBASIC16.28■□□□□ 0.2
ALYREFQ86V81 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 AC126915.1-201ENST00000522847 1038 ntBASIC16.28■□□□□ 0.2
ALYREFQ86V81 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 AC073389.1-201ENST00000595595 795 ntBASIC16.28■□□□□ 0.2
ALYREFQ86V81 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 AC079416.2-201ENST00000625035 1193 ntBASIC16.28■□□□□ 0.2
ALYREFQ86V81 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ALYREFQ86V81 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ALYREFQ86V81 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ALYREFQ86V81 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ALYREFQ86V81 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ALYREFQ86V81 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ALYREFQ86V81 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms