Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AL591684.3-201ENST00000605187 298 ntBASIC12.95□□□□□ -0.34
ZNF546Q86UE3 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.94□□□□□ -0.34
ZNF546Q86UE3 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 AC018892.3-201ENST00000623986 2499 ntBASIC12.94□□□□□ -0.34
ZNF546Q86UE3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 TMPOP1-202ENST00000424642 1267 ntBASIC12.94□□□□□ -0.34
ZNF546Q86UE3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 MIR4313-201ENST00000580760 101 ntBASIC12.94□□□□□ -0.34
ZNF546Q86UE3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 AC064862.7-201ENST00000604520 867 ntBASIC12.94□□□□□ -0.34
ZNF546Q86UE3 AC116407.4-201ENST00000623319 1061 ntBASIC12.94□□□□□ -0.34
ZNF546Q86UE3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 AC105206.1-202ENST00000314927 2368 ntBASIC12.94□□□□□ -0.34
ZNF546Q86UE3 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF546Q86UE3 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 Z82170.1-201ENST00000625081 3192 ntBASIC12.93□□□□□ -0.34
ZNF546Q86UE3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ZNF546Q86UE3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms