Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LYSMD3Q7Z3D4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
LYSMD3Q7Z3D4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.58■□□□□ 0.09
LYSMD3Q7Z3D4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
LYSMD3Q7Z3D4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 AC098850.1-201ENST00000419919 790 ntBASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 AC017007.3-201ENST00000479865 435 ntBASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 AC123567.1-201ENST00000548294 1261 ntBASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 AC025181.2-201ENST00000606994 802 ntBASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 AC093726.1-201ENST00000608064 963 ntBASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 AL662799.1-202ENST00000614205 422 ntBASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LYSMD3Q7Z3D4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 AC087499.6-201ENST00000411576 835 ntBASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 AC005034.1-201ENST00000426657 489 ntBASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 AC005225.4-201ENST00000557330 545 ntBASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 AC008494.3-201ENST00000606615 944 ntBASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 AC138035.3-201ENST00000622706 2791 ntBASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LYSMD3Q7Z3D4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms