Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 AC236430.1-201ENST00000402231 743 ntBASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 FO393414.2-201ENST00000405153 598 ntBASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 SPDYE17-201ENST00000412399 783 ntBASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 AC138761.1-201ENST00000584393 385 ntBASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 LINC02560-201ENST00000596379 459 ntBASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 ST20-AS1-201ENST00000560255 4223 ntBASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 TSSK5P-201ENST00000423978 907 ntBASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 AC002472.2-201ENST00000442739 958 ntBASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 SDHAP3-202ENST00000515467 728 ntBASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 LINC02084-201ENST00000606069 1096 ntBASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 AC008761.3-201ENST00000624803 892 ntBASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.39□□□□□ -0.11
CHMP1BQ7LBR1 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms