Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC149Q6ZUS6 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 AL354989.2-201ENST00000435838 1540 ntBASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 AL662890.1-201ENST00000396818 632 ntBASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 AL139094.1-201ENST00000405549 1188 ntBASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 AC005077.2-201ENST00000449786 690 ntBASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC149Q6ZUS6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 FNTAP2-201ENST00000430308 634 ntBASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 BX284668.4-201ENST00000453917 508 ntBASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms