Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 NUS1P3-201ENST00000423502 862 ntBASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 RNA5SP486-201ENST00000515961 83 ntBASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 KRT8P44-201ENST00000441609 1350 ntBASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 AC020907.1-201ENST00000616460 1350 ntBASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 CD8B2-202ENST00000417670 633 ntBASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 AL590640.2-201ENST00000457038 527 ntBASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 FAM86HP-204ENST00000513466 959 ntBASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 AC084364.1-201ENST00000551967 1556 ntBASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 TSPY26P-202ENST00000565928 3884 ntBASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC62Q6P9F0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
CCDC62Q6P9F0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC62Q6P9F0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC62Q6P9F0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC62Q6P9F0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC62Q6P9F0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
CCDC62Q6P9F0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CCDC62Q6P9F0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC62Q6P9F0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC62Q6P9F0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC62Q6P9F0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC62Q6P9F0 AC007787.1-201ENST00000588095 1583 ntBASIC17.33■□□□□ 0.37
CCDC62Q6P9F0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC62Q6P9F0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
CCDC62Q6P9F0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC62Q6P9F0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC62Q6P9F0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 LINC02199-201ENST00000506655 2702 ntBASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 AHCYP2-201ENST00000430630 1300 ntBASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 GOLGA2P4-201ENST00000441462 777 ntBASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms