Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 MIR4259-201ENST00000584466 101 ntBASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 COX11-210ENST00000639671 696 ntBASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 FLJ16779-201ENST00000612722 7638 ntBASIC14.34□□□□□ -0.11
H3F3CQ6NXT2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H3F3CQ6NXT2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
H3F3CQ6NXT2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.33□□□□□ -0.11
H3F3CQ6NXT2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
H3F3CQ6NXT2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.11
H3F3CQ6NXT2 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H3F3CQ6NXT2 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.33□□□□□ -0.11
H3F3CQ6NXT2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
H3F3CQ6NXT2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
H3F3CQ6NXT2 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
H3F3CQ6NXT2 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 AC092933.1-201ENST00000393644 945 ntBASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 AC007274.1-201ENST00000439805 662 ntBASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 AC104989.1-201ENST00000519711 778 ntBASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 AC134312.5-201ENST00000568031 1313 ntBASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
H3F3CQ6NXT2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms