Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 AC019294.4-201ENST00000561777 2905 ntBASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 AC073439.1-201ENST00000624121 1774 ntBASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 AL122018.1-201ENST00000446607 2310 ntBASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 DUSP5P1-201ENST00000441325 1139 ntBASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 RPS15P9-201ENST00000494093 319 ntBASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 AC243562.2-201ENST00000561247 970 ntBASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 AC012615.1-201ENST00000565797 1299 ntBASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 MIR3180-1-201ENST00000580374 94 ntBASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 MIR3180-3-201ENST00000584616 94 ntBASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ERCC6LQ2NKX8 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ERCC6LQ2NKX8 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ERCC6LQ2NKX8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
ERCC6LQ2NKX8 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ERCC6LQ2NKX8 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
ERCC6LQ2NKX8 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
ERCC6LQ2NKX8 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
ERCC6LQ2NKX8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ERCC6LQ2NKX8 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.46■□□□□ 0.22
ERCC6LQ2NKX8 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ERCC6LQ2NKX8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 NUTM2HP-201ENST00000442076 2498 ntBASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 AC023090.2-201ENST00000625182 2110 ntBASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 MTDHP4-201ENST00000600287 670 ntBASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 AC099336.1-202ENST00000602961 463 ntBASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
ERCC6LQ2NKX8 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms