Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 HOMER2P2-201ENST00000451621 847 ntBASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 CHMP4BP1-201ENST00000556017 588 ntBASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 AC138951.2-201ENST00000623455 1161 ntBASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 AC015818.8-201ENST00000587907 1519 ntBASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 HINT2P1-201ENST00000419438 481 ntBASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 MTX1P1-201ENST00000440904 838 ntBASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 RN7SL769P-201ENST00000469386 295 ntBASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 MIR4706-201ENST00000582134 82 ntBASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
CTC1Q2NKJ3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.52■□□□□ 0.23
CTC1Q2NKJ3 AL138709.1-201ENST00000614840 1693 ntBASIC16.52■□□□□ 0.23
CTC1Q2NKJ3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.52■□□□□ 0.23
CTC1Q2NKJ3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CTC1Q2NKJ3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CTC1Q2NKJ3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CTC1Q2NKJ3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CTC1Q2NKJ3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CTC1Q2NKJ3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.52■□□□□ 0.23
CTC1Q2NKJ3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CTC1Q2NKJ3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 AL592424.1-201ENST00000563624 1536 ntBASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms