Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 NUS1P3-201ENST00000423502 862 ntBASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.89■□□□□ 0.46
SHROOM1Q2M3G4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SHROOM1Q2M3G4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 AC055811.4-201ENST00000624039 1754 ntBASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 HSPB1P2-201ENST00000448722 546 ntBASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 HIST2H2BC-201ENST00000498492 580 ntBASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 PPY2P-201ENST00000582808 702 ntBASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM1Q2M3G4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 AC004945.1-201ENST00000416738 983 ntBASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 FAM8A4P-201ENST00000435433 1213 ntBASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 AC026434.2-201ENST00000506094 1078 ntBASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 COX5BP1-201ENST00000507622 393 ntBASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 AP001258.2-201ENST00000529891 490 ntBASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 AC005730.2-201ENST00000564549 1184 ntBASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 AL451050.2-201ENST00000606967 682 ntBASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM1Q2M3G4 CLUHP2-201ENST00000426660 1303 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms