Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC27Q2M243 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
CCDC27Q2M243 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC27Q2M243 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC27Q2M243 RNU1-114P-201ENST00000365297 166 ntBASIC20.03■□□□□ 0.8
CCDC27Q2M243 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC27Q2M243 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC27Q2M243 RN7SL692P-201ENST00000464677 288 ntBASIC20.03■□□□□ 0.8
CCDC27Q2M243 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC27Q2M243 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC27Q2M243 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC27Q2M243 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC27Q2M243 METTL26-214ENST00000614890 801 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC27Q2M243 LILRP1-201ENST00000444199 1370 ntBASIC20.03■□□□□ 0.8
CCDC27Q2M243 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC27Q2M243 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC27Q2M243 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 AL359258.3-201ENST00000622910 2331 ntBASIC20.03■□□□□ 0.8
CCDC27Q2M243 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC27Q2M243 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CCDC27Q2M243 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 AL157414.3-201ENST00000624276 1954 ntBASIC20.03■□□□□ 0.8
CCDC27Q2M243 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC27Q2M243 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CCDC27Q2M243 LINC00528-201ENST00000600723 2160 ntBASIC20.02■□□□□ 0.8
CCDC27Q2M243 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC27Q2M243 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CCDC27Q2M243 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC27Q2M243 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC27Q2M243 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CCDC27Q2M243 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC27Q2M243 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 ACTBP8-201ENST00000403258 1108 ntBASIC20.02■□□□□ 0.8
CCDC27Q2M243 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC27Q2M243 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
CCDC27Q2M243 AC093433.1-201ENST00000458048 571 ntBASIC20.02■□□□□ 0.8
CCDC27Q2M243 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC27Q2M243 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CCDC27Q2M243 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC27Q2M243 ATF5-205ENST00000600336 682 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC27Q2M243 AL358472.5-202ENST00000641448 1267 ntBASIC20.02■□□□□ 0.8
CCDC27Q2M243 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC27Q2M243 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC27Q2M243 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC27Q2M243 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC27Q2M243 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC27Q2M243 GSN-215ENST00000545652 2428 ntTSL 2 BASIC20.02■□□□□ 0.79
CCDC27Q2M243 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC20.02■□□□□ 0.79
CCDC27Q2M243 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC27Q2M243 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC27Q2M243 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC27Q2M243 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC27Q2M243 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC27Q2M243 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC27Q2M243 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC27Q2M243 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC27Q2M243 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC27Q2M243 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC27Q2M243 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms