Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FOXC1Q12948 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.45□□□□□ -0.1
FOXC1Q12948 AGPAT5P1-201ENST00000455855 1019 ntBASIC14.45□□□□□ -0.1
FOXC1Q12948 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXC1Q12948 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXC1Q12948 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXC1Q12948 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXC1Q12948 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.45□□□□□ -0.1
FOXC1Q12948 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
FOXC1Q12948 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXC1Q12948 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXC1Q12948 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXC1Q12948 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
FOXC1Q12948 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXC1Q12948 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXC1Q12948 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
FOXC1Q12948 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXC1Q12948 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXC1Q12948 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXC1Q12948 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXC1Q12948 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
FOXC1Q12948 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXC1Q12948 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FOXC1Q12948 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXC1Q12948 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXC1Q12948 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXC1Q12948 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.44□□□□□ -0.1
FOXC1Q12948 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.44□□□□□ -0.1
FOXC1Q12948 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
FOXC1Q12948 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.44□□□□□ -0.1
FOXC1Q12948 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.44□□□□□ -0.1
FOXC1Q12948 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.44□□□□□ -0.1
FOXC1Q12948 PP12613-201ENST00000424958 2230 ntBASIC14.44□□□□□ -0.1
FOXC1Q12948 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 AC239868.1-201ENST00000369385 493 ntBASIC14.44□□□□□ -0.1
FOXC1Q12948 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.44□□□□□ -0.1
FOXC1Q12948 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.44□□□□□ -0.1
FOXC1Q12948 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.44□□□□□ -0.1
FOXC1Q12948 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.44□□□□□ -0.1
FOXC1Q12948 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.44□□□□□ -0.1
FOXC1Q12948 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.44□□□□□ -0.1
FOXC1Q12948 RN7SL258P-201ENST00000478664 300 ntBASIC14.44□□□□□ -0.1
FOXC1Q12948 AC026803.1-201ENST00000569130 274 ntBASIC14.44□□□□□ -0.1
FOXC1Q12948 MIR4783-201ENST00000580343 82 ntBASIC14.44□□□□□ -0.1
FOXC1Q12948 RPL17P45-201ENST00000586289 509 ntBASIC14.44□□□□□ -0.1
FOXC1Q12948 AC009955.4-201ENST00000597192 544 ntBASIC14.44□□□□□ -0.1
FOXC1Q12948 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.44□□□□□ -0.1
FOXC1Q12948 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.44□□□□□ -0.1
FOXC1Q12948 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
FOXC1Q12948 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.44□□□□□ -0.1
FOXC1Q12948 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.44□□□□□ -0.1
FOXC1Q12948 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.44□□□□□ -0.1
FOXC1Q12948 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXC1Q12948 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXC1Q12948 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.43□□□□□ -0.1
FOXC1Q12948 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.43□□□□□ -0.1
FOXC1Q12948 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
FOXC1Q12948 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 AC005915.1-201ENST00000624912 2018 ntBASIC14.43□□□□□ -0.1
FOXC1Q12948 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.43□□□□□ -0.1
FOXC1Q12948 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXC1Q12948 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXC1Q12948 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC14.43□□□□□ -0.1
FOXC1Q12948 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.43□□□□□ -0.1
FOXC1Q12948 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.43□□□□□ -0.1
FOXC1Q12948 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.43□□□□□ -0.1
FOXC1Q12948 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXC1Q12948 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC14.43□□□□□ -0.1
FOXC1Q12948 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.43□□□□□ -0.1
FOXC1Q12948 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms