Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
PCDH1Q08174 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.96□□□□□ -0.01
PCDH1Q08174 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDH1Q08174 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDH1Q08174 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDH1Q08174 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.96□□□□□ -0.01
PCDH1Q08174 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.96□□□□□ -0.01
PCDH1Q08174 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDH1Q08174 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDH1Q08174 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.96□□□□□ -0.01
PCDH1Q08174 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.96□□□□□ -0.01
PCDH1Q08174 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.96□□□□□ -0.01
PCDH1Q08174 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
PCDH1Q08174 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDH1Q08174 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDH1Q08174 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDH1Q08174 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.96□□□□□ -0.01
PCDH1Q08174 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDH1Q08174 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
PCDH1Q08174 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.96□□□□□ -0.02
PCDH1Q08174 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.96□□□□□ -0.02
PCDH1Q08174 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
PCDH1Q08174 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCDH1Q08174 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCDH1Q08174 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
PCDH1Q08174 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
PCDH1Q08174 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.96□□□□□ -0.02
PCDH1Q08174 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PCDH1Q08174 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PCDH1Q08174 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PCDH1Q08174 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDH1Q08174 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 AC022144.1-201ENST00000602255 1580 ntBASIC14.95□□□□□ -0.02
PCDH1Q08174 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PCDH1Q08174 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDH1Q08174 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDH1Q08174 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.95□□□□□ -0.02
PCDH1Q08174 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDH1Q08174 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDH1Q08174 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDH1Q08174 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDH1Q08174 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDH1Q08174 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDH1Q08174 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.95□□□□□ -0.02
PCDH1Q08174 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDH1Q08174 SRD5A3P1-201ENST00000603021 949 ntBASIC14.95□□□□□ -0.02
PCDH1Q08174 AL390955.2-201ENST00000603032 514 ntBASIC14.95□□□□□ -0.02
PCDH1Q08174 AC008738.7-201ENST00000609744 511 ntBASIC14.95□□□□□ -0.02
PCDH1Q08174 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDH1Q08174 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PCDH1Q08174 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDH1Q08174 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDH1Q08174 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH1Q08174 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
PCDH1Q08174 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDH1Q08174 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PCDH1Q08174 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDH1Q08174 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.94□□□□□ -0.02
PCDH1Q08174 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PCDH1Q08174 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDH1Q08174 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDH1Q08174 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDH1Q08174 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PCDH1Q08174 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDH1Q08174 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.94□□□□□ -0.02
PCDH1Q08174 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PCDH1Q08174 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PCDH1Q08174 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDH1Q08174 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDH1Q08174 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDH1Q08174 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDH1Q08174 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms