Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX1P83916 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX1P83916 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CBX1P83916 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CBX1P83916 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CBX1P83916 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CBX1P83916 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CBX1P83916 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CBX1P83916 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC16.2■□□□□ 0.18
CBX1P83916 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CBX1P83916 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX1P83916 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX1P83916 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 FAM220CP-201ENST00000395253 831 ntBASIC16.2■□□□□ 0.18
CBX1P83916 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.2■□□□□ 0.18
CBX1P83916 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX1P83916 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.2■□□□□ 0.18
CBX1P83916 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CBX1P83916 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX1P83916 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.2■□□□□ 0.18
CBX1P83916 AL049637.2-201ENST00000641778 930 ntBASIC16.2■□□□□ 0.18
CBX1P83916 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX1P83916 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.2■□□□□ 0.18
CBX1P83916 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.2■□□□□ 0.18
CBX1P83916 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CBX1P83916 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.2■□□□□ 0.18
CBX1P83916 BX324167.2-201ENST00000623717 3316 ntBASIC16.2■□□□□ 0.18
CBX1P83916 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX1P83916 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CBX1P83916 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CBX1P83916 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX1P83916 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX1P83916 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CBX1P83916 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBX1P83916 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX1P83916 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CBX1P83916 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CBX1P83916 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBX1P83916 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX1P83916 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CBX1P83916 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CBX1P83916 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX1P83916 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX1P83916 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX1P83916 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CBX1P83916 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX1P83916 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX1P83916 AC018442.1-201ENST00000421439 2061 ntBASIC16.19■□□□□ 0.18
CBX1P83916 AC134407.2-201ENST00000625089 1978 ntBASIC16.19■□□□□ 0.18
CBX1P83916 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX1P83916 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX1P83916 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CBX1P83916 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CBX1P83916 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBX1P83916 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX1P83916 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CBX1P83916 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.19■□□□□ 0.18
CBX1P83916 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CBX1P83916 AC004945.1-201ENST00000416738 983 ntBASIC16.19■□□□□ 0.18
CBX1P83916 RBM17P1-201ENST00000453646 1190 ntBASIC16.19■□□□□ 0.18
CBX1P83916 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX1P83916 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX1P83916 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX1P83916 AP003071.4-201ENST00000562276 1284 ntBASIC16.19■□□□□ 0.18
CBX1P83916 CYP2A7P1-201ENST00000595391 815 ntBASIC16.19■□□□□ 0.18
CBX1P83916 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.19■□□□□ 0.18
CBX1P83916 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX1P83916 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX1P83916 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.19■□□□□ 0.18
CBX1P83916 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX1P83916 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBX1P83916 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX1P83916 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBX1P83916 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX1P83916 AC018892.3-201ENST00000623986 2499 ntBASIC16.19■□□□□ 0.18
CBX1P83916 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBX1P83916 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX1P83916 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CBX1P83916 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CBX1P83916 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX1P83916 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CBX1P83916 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX1P83916 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms