Protein–RNA interactions for Protein: P79483

HLA-DRB3, HLA class II histocompatibility antigen, DR beta 3 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB3P79483 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DRB3P79483 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DRB3P79483 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
HLA-DRB3P79483 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
HLA-DRB3P79483 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DRB3P79483 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DRB3P79483 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DRB3P79483 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.03□□□□□ -0.32
HLA-DRB3P79483 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DRB3P79483 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DRB3P79483 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DRB3P79483 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DRB3P79483 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.03□□□□□ -0.32
HLA-DRB3P79483 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DRB3P79483 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.02□□□□□ -0.32
HLA-DRB3P79483 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DRB3P79483 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DRB3P79483 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DRB3P79483 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
HLA-DRB3P79483 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
HLA-DRB3P79483 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
HLA-DRB3P79483 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.02□□□□□ -0.32
HLA-DRB3P79483 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DRB3P79483 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DRB3P79483 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
HLA-DRB3P79483 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DRB3P79483 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DRB3P79483 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
HLA-DRB3P79483 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DRB3P79483 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DRB3P79483 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 AC003101.2-201ENST00000612557 442 ntBASIC13.02□□□□□ -0.33
HLA-DRB3P79483 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 FGD5P1-202ENST00000614866 2498 ntBASIC13.02□□□□□ -0.33
HLA-DRB3P79483 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.02□□□□□ -0.33
HLA-DRB3P79483 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.02□□□□□ -0.33
HLA-DRB3P79483 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB3P79483 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 AC007191.1-201ENST00000623179 2995 ntBASIC13.01□□□□□ -0.33
HLA-DRB3P79483 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.01□□□□□ -0.33
HLA-DRB3P79483 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 AL627223.1-201ENST00000416693 442 ntBASIC13.01□□□□□ -0.33
HLA-DRB3P79483 HIST3H2BA-201ENST00000436555 524 ntBASIC13.01□□□□□ -0.33
HLA-DRB3P79483 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB3P79483 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms