Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 MIR6775-201ENST00000617557 69 ntBASIC13.75□□□□□ -0.21
NKX6-1P78426 AC005702.4-201ENST00000618393 416 ntBASIC13.75□□□□□ -0.21
NKX6-1P78426 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.75□□□□□ -0.21
NKX6-1P78426 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX6-1P78426 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
NKX6-1P78426 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
NKX6-1P78426 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX6-1P78426 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.75□□□□□ -0.21
NKX6-1P78426 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX6-1P78426 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX6-1P78426 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX6-1P78426 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX6-1P78426 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.74□□□□□ -0.21
NKX6-1P78426 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 AC144831.1-201ENST00000573312 2656 ntBASIC13.74□□□□□ -0.21
NKX6-1P78426 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
NKX6-1P78426 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
NKX6-1P78426 BOLA2P3-201ENST00000404566 256 ntBASIC13.74□□□□□ -0.21
NKX6-1P78426 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 TMEM14DP-201ENST00000422205 345 ntBASIC13.74□□□□□ -0.21
NKX6-1P78426 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.74□□□□□ -0.21
NKX6-1P78426 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.74□□□□□ -0.21
NKX6-1P78426 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.74□□□□□ -0.21
NKX6-1P78426 AC093726.1-201ENST00000608064 963 ntBASIC13.74□□□□□ -0.21
NKX6-1P78426 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.74□□□□□ -0.21
NKX6-1P78426 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.74□□□□□ -0.21
NKX6-1P78426 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.74□□□□□ -0.21
NKX6-1P78426 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NKX6-1P78426 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.74□□□□□ -0.21
NKX6-1P78426 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.74□□□□□ -0.21
NKX6-1P78426 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.74□□□□□ -0.21
NKX6-1P78426 AL133338.1-201ENST00000565695 1517 ntBASIC13.74□□□□□ -0.21
NKX6-1P78426 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
NKX6-1P78426 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX6-1P78426 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX6-1P78426 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.73□□□□□ -0.21
NKX6-1P78426 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX6-1P78426 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX6-1P78426 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.73□□□□□ -0.21
NKX6-1P78426 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
NKX6-1P78426 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.73□□□□□ -0.21
NKX6-1P78426 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX6-1P78426 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
NKX6-1P78426 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX6-1P78426 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.73□□□□□ -0.21
NKX6-1P78426 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX6-1P78426 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX6-1P78426 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX6-1P78426 AC104989.1-201ENST00000519711 778 ntBASIC13.73□□□□□ -0.21
NKX6-1P78426 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.73□□□□□ -0.21
NKX6-1P78426 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.73□□□□□ -0.21
NKX6-1P78426 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX6-1P78426 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.73□□□□□ -0.21
NKX6-1P78426 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.73□□□□□ -0.21
NKX6-1P78426 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
NKX6-1P78426 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NKX6-1P78426 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX6-1P78426 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX6-1P78426 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms