Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.43■□□□□ 0.38
TPM4P67936 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TPM4P67936 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.43■□□□□ 0.38
TPM4P67936 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC17.43■□□□□ 0.38
TPM4P67936 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.43■□□□□ 0.38
TPM4P67936 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.43■□□□□ 0.38
TPM4P67936 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM4P67936 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM4P67936 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM4P67936 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.43■□□□□ 0.38
TPM4P67936 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.43■□□□□ 0.38
TPM4P67936 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TPM4P67936 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.43■□□□□ 0.38
TPM4P67936 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.43■□□□□ 0.38
TPM4P67936 IGHV3-22-201ENST00000520721 359 ntBASIC17.43■□□□□ 0.38
TPM4P67936 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM4P67936 HNRNPUP1-201ENST00000554987 333 ntBASIC17.43■□□□□ 0.38
TPM4P67936 AC018845.2-201ENST00000568326 409 ntBASIC17.43■□□□□ 0.38
TPM4P67936 AC027307.2-201ENST00000591252 911 ntBASIC17.43■□□□□ 0.38
TPM4P67936 AC008267.7-201ENST00000624570 1194 ntBASIC17.43■□□□□ 0.38
TPM4P67936 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TPM4P67936 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM4P67936 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM4P67936 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM4P67936 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM4P67936 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC17.43■□□□□ 0.38
TPM4P67936 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TPM4P67936 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
TPM4P67936 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.43■□□□□ 0.38
TPM4P67936 AKAP8P1-201ENST00000434743 1349 ntBASIC17.43■□□□□ 0.38
TPM4P67936 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM4P67936 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM4P67936 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.43■□□□□ 0.38
TPM4P67936 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM4P67936 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TPM4P67936 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TPM4P67936 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC17.42■□□□□ 0.38
TPM4P67936 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM4P67936 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TPM4P67936 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM4P67936 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TPM4P67936 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.42■□□□□ 0.38
TPM4P67936 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.42■□□□□ 0.38
TPM4P67936 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM4P67936 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.42■□□□□ 0.38
TPM4P67936 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM4P67936 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 MIR1224-201ENST00000408193 85 ntBASIC17.42■□□□□ 0.38
TPM4P67936 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.42■□□□□ 0.38
TPM4P67936 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM4P67936 AC079781.3-201ENST00000449110 356 ntBASIC17.42■□□□□ 0.38
TPM4P67936 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.42■□□□□ 0.38
TPM4P67936 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
TPM4P67936 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.42■□□□□ 0.38
TPM4P67936 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TPM4P67936 AC064836.3-201ENST00000607928 673 ntBASIC17.42■□□□□ 0.38
TPM4P67936 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM4P67936 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM4P67936 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM4P67936 TET3-201ENST00000305799 5174 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM4P67936 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TPM4P67936 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM4P67936 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
TPM4P67936 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TPM4P67936 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM4P67936 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TPM4P67936 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM4P67936 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM4P67936 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM4P67936 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TPM4P67936 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TPM4P67936 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TPM4P67936 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TPM4P67936 AC004870.1-201ENST00000315132 882 ntBASIC17.41■□□□□ 0.38
TPM4P67936 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.41■□□□□ 0.38
TPM4P67936 HLA-H-201ENST00000383620 1096 ntBASIC17.41■□□□□ 0.38
TPM4P67936 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
TPM4P67936 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.41■□□□□ 0.38
TPM4P67936 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms