Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
YBX1P67809 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.09■□□□□ 0.01
YBX1P67809 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
YBX1P67809 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.09■□□□□ 0.01
YBX1P67809 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.09■□□□□ 0.01
YBX1P67809 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.09■□□□□ 0.01
YBX1P67809 API5-211ENST00000534695 560 ntTSL 5 BASIC15.09■□□□□ 0.01
YBX1P67809 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.09■□□□□ 0.01
YBX1P67809 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
YBX1P67809 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
YBX1P67809 AC004233.3-201ENST00000607794 1269 ntBASIC15.09■□□□□ 0.01
YBX1P67809 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
YBX1P67809 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
YBX1P67809 LINC01101-201ENST00000622953 1884 ntBASIC15.09■□□□□ 0.01
YBX1P67809 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
YBX1P67809 AJ011931.1-201ENST00000618749 2492 ntBASIC15.09■□□□□ 0.01
YBX1P67809 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
YBX1P67809 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
YBX1P67809 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
YBX1P67809 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
YBX1P67809 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
YBX1P67809 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
YBX1P67809 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
YBX1P67809 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
YBX1P67809 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
YBX1P67809 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
YBX1P67809 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
YBX1P67809 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
YBX1P67809 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
YBX1P67809 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
YBX1P67809 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
YBX1P67809 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
YBX1P67809 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.08■□□□□ 0.01
YBX1P67809 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.08■□□□□ 0
YBX1P67809 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
YBX1P67809 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.08■□□□□ 0
YBX1P67809 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
YBX1P67809 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 TERF1P3-201ENST00000505638 1227 ntBASIC15.08■□□□□ 0
YBX1P67809 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.08■□□□□ 0
YBX1P67809 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.08■□□□□ 0
YBX1P67809 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.08■□□□□ 0
YBX1P67809 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.08■□□□□ 0
YBX1P67809 AC190387.1-201ENST00000551683 408 ntBASIC15.08■□□□□ 0
YBX1P67809 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
YBX1P67809 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
YBX1P67809 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.08■□□□□ 0
YBX1P67809 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
YBX1P67809 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.08■□□□□ 0
YBX1P67809 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
YBX1P67809 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.08■□□□□ 0
YBX1P67809 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
YBX1P67809 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.08■□□□□ 0
YBX1P67809 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
YBX1P67809 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.07■□□□□ 0
YBX1P67809 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
YBX1P67809 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.07■□□□□ 0
YBX1P67809 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 FGD5P1-202ENST00000614866 2498 ntBASIC15.07■□□□□ 0
YBX1P67809 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.07■□□□□ 0
YBX1P67809 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
YBX1P67809 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.07■□□□□ 0
YBX1P67809 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.07■□□□□ 0
YBX1P67809 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.07■□□□□ 0
YBX1P67809 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.07■□□□□ 0
YBX1P67809 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
YBX1P67809 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.07■□□□□ 0
YBX1P67809 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms