Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SKP1P63208 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.73□□□□□ -0.05
SKP1P63208 AC067750.1-201ENST00000608826 6545 ntBASIC14.73□□□□□ -0.05
SKP1P63208 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SKP1P63208 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SKP1P63208 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.72□□□□□ -0.05
SKP1P63208 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
SKP1P63208 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SKP1P63208 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SKP1P63208 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.72□□□□□ -0.05
SKP1P63208 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.72□□□□□ -0.05
SKP1P63208 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.72□□□□□ -0.05
SKP1P63208 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.72□□□□□ -0.05
SKP1P63208 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.72□□□□□ -0.05
SKP1P63208 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.72□□□□□ -0.05
SKP1P63208 AC008494.3-201ENST00000606615 944 ntBASIC14.72□□□□□ -0.05
SKP1P63208 AC025181.2-201ENST00000606994 802 ntBASIC14.72□□□□□ -0.05
SKP1P63208 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SKP1P63208 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 LINC00554-201ENST00000564841 3011 ntBASIC14.72□□□□□ -0.05
SKP1P63208 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.72□□□□□ -0.05
SKP1P63208 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SKP1P63208 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.72□□□□□ -0.05
SKP1P63208 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.72□□□□□ -0.05
SKP1P63208 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SKP1P63208 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
SKP1P63208 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.71□□□□□ -0.05
SKP1P63208 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.71□□□□□ -0.05
SKP1P63208 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SKP1P63208 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SKP1P63208 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SKP1P63208 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
SKP1P63208 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.71□□□□□ -0.05
SKP1P63208 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SKP1P63208 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.71□□□□□ -0.05
SKP1P63208 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.71□□□□□ -0.05
SKP1P63208 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.71□□□□□ -0.05
SKP1P63208 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SKP1P63208 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.71□□□□□ -0.05
SKP1P63208 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.71□□□□□ -0.05
SKP1P63208 ENPP7P5-201ENST00000541031 1031 ntBASIC14.71□□□□□ -0.05
SKP1P63208 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SKP1P63208 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.71□□□□□ -0.05
SKP1P63208 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.71□□□□□ -0.05
SKP1P63208 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.71□□□□□ -0.05
SKP1P63208 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SKP1P63208 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.71□□□□□ -0.05
SKP1P63208 MIR8072-201ENST00000614241 80 ntBASIC14.71□□□□□ -0.05
SKP1P63208 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.71□□□□□ -0.05
SKP1P63208 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
SKP1P63208 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SKP1P63208 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SKP1P63208 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SKP1P63208 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
SKP1P63208 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SKP1P63208 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.71□□□□□ -0.06
SKP1P63208 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
SKP1P63208 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
SKP1P63208 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms