Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D3P61077 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D3P61077 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
UBE2D3P61077 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D3P61077 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D3P61077 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D3P61077 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D3P61077 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2D3P61077 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2D3P61077 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC11.09□□□□□ -0.63
UBE2D3P61077 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
UBE2D3P61077 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.09□□□□□ -0.63
UBE2D3P61077 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.09□□□□□ -0.63
UBE2D3P61077 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D3P61077 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D3P61077 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
UBE2D3P61077 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D3P61077 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D3P61077 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D3P61077 AL353705.2-201ENST00000428243 662 ntBASIC11.09□□□□□ -0.63
UBE2D3P61077 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.09□□□□□ -0.63
UBE2D3P61077 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2D3P61077 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2D3P61077 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC11.09□□□□□ -0.63
UBE2D3P61077 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2D3P61077 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.09□□□□□ -0.63
UBE2D3P61077 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC11.09□□□□□ -0.63
UBE2D3P61077 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2D3P61077 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.09□□□□□ -0.63
UBE2D3P61077 AC097359.3-201ENST00000603982 1210 ntBASIC11.09□□□□□ -0.63
UBE2D3P61077 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.09□□□□□ -0.63
UBE2D3P61077 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC11.09□□□□□ -0.63
UBE2D3P61077 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.09□□□□□ -0.63
UBE2D3P61077 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D3P61077 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.09□□□□□ -0.63
UBE2D3P61077 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D3P61077 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
UBE2D3P61077 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
UBE2D3P61077 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2D3P61077 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2D3P61077 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
UBE2D3P61077 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC11.09□□□□□ -0.63
UBE2D3P61077 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2D3P61077 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2D3P61077 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.63
UBE2D3P61077 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2D3P61077 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2D3P61077 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
UBE2D3P61077 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
UBE2D3P61077 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
UBE2D3P61077 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
UBE2D3P61077 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2D3P61077 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
UBE2D3P61077 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
UBE2D3P61077 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2D3P61077 PARN-202ENST00000420015 2360 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2D3P61077 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
UBE2D3P61077 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC11.08□□□□□ -0.64
UBE2D3P61077 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 MIR574-201ENST00000385209 96 ntBASIC11.08□□□□□ -0.64
UBE2D3P61077 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
UBE2D3P61077 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
UBE2D3P61077 AC136604.1-201ENST00000418535 575 ntBASIC11.08□□□□□ -0.64
UBE2D3P61077 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2D3P61077 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC11.08□□□□□ -0.64
UBE2D3P61077 ALG1L5P-201ENST00000482043 771 ntBASIC11.08□□□□□ -0.64
UBE2D3P61077 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
UBE2D3P61077 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
UBE2D3P61077 POLD2P1-201ENST00000511220 997 ntBASIC11.08□□□□□ -0.64
UBE2D3P61077 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC11.08□□□□□ -0.64
UBE2D3P61077 TSFM-210ENST00000550559 897 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2D3P61077 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.08□□□□□ -0.64
UBE2D3P61077 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2D3P61077 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.08□□□□□ -0.64
UBE2D3P61077 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.08□□□□□ -0.64
UBE2D3P61077 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2D3P61077 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2D3P61077 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2D3P61077 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms