Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
ERVFC1-1P60608 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
ERVFC1-1P60608 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.14□□□□□ -0.47
ERVFC1-1P60608 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ERVFC1-1P60608 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.14□□□□□ -0.47
ERVFC1-1P60608 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ERVFC1-1P60608 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
ERVFC1-1P60608 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 AC131902.2-201ENST00000566892 2172 ntBASIC12.13□□□□□ -0.47
ERVFC1-1P60608 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 HCG4-201ENST00000418983 998 ntBASIC12.13□□□□□ -0.47
ERVFC1-1P60608 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 AC074051.2-201ENST00000565115 352 ntBASIC12.13□□□□□ -0.47
ERVFC1-1P60608 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ERVFC1-1P60608 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 AL928921.2-201ENST00000641325 2442 ntBASIC12.12□□□□□ -0.47
ERVFC1-1P60608 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 AC079776.2-201ENST00000641154 1609 ntBASIC12.12□□□□□ -0.47
ERVFC1-1P60608 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 ZBED1P1-201ENST00000502364 1930 ntBASIC12.12□□□□□ -0.47
ERVFC1-1P60608 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms