Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 KRT223P-202ENST00000449164 1292 ntBASIC17.76■□□□□ 0.43
CHMP4BP1P59074 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 CU634019.7-201ENST00000624153 1185 ntBASIC17.76■□□□□ 0.43
CHMP4BP1P59074 FP236241.2-201ENST00000624906 1185 ntBASIC17.76■□□□□ 0.43
CHMP4BP1P59074 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 AC133539.2-201ENST00000604757 467 ntBASIC17.75■□□□□ 0.43
CHMP4BP1P59074 AL158212.4-201ENST00000624062 1286 ntBASIC17.75■□□□□ 0.43
CHMP4BP1P59074 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 PRAL-201ENST00000624952 3286 ntBASIC17.75■□□□□ 0.43
CHMP4BP1P59074 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 AC134407.2-201ENST00000625089 1978 ntBASIC17.75■□□□□ 0.43
CHMP4BP1P59074 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP4BP1P59074 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 KRT8P22-201ENST00000562317 1415 ntBASIC17.74■□□□□ 0.43
CHMP4BP1P59074 AP003680.1-201ENST00000598970 3660 ntBASIC17.74■□□□□ 0.43
CHMP4BP1P59074 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 Z97205.2-201ENST00000564697 1639 ntBASIC17.74■□□□□ 0.43
CHMP4BP1P59074 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 TARDBPP1-201ENST00000442013 1203 ntBASIC17.74■□□□□ 0.43
CHMP4BP1P59074 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.74■□□□□ 0.43
CHMP4BP1P59074 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms