Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN6P56747 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN6P56747 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLDN6P56747 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.82□□□□□ -0.04
CLDN6P56747 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CLDN6P56747 HSPB1P2-201ENST00000448722 546 ntBASIC14.82□□□□□ -0.04
CLDN6P56747 SPTLC1P5-201ENST00000450718 252 ntBASIC14.82□□□□□ -0.04
CLDN6P56747 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN6P56747 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.82□□□□□ -0.04
CLDN6P56747 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN6P56747 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.82□□□□□ -0.04
CLDN6P56747 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN6P56747 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.82□□□□□ -0.04
CLDN6P56747 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.82□□□□□ -0.04
CLDN6P56747 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN6P56747 NDUFV2P1-201ENST00000596415 907 ntBASIC14.82□□□□□ -0.04
CLDN6P56747 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN6P56747 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN6P56747 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CLDN6P56747 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
CLDN6P56747 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN6P56747 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLDN6P56747 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN6P56747 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN6P56747 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN6P56747 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN6P56747 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN6P56747 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CLDN6P56747 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN6P56747 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN6P56747 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN6P56747 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN6P56747 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN6P56747 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN6P56747 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN6P56747 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN6P56747 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CLDN6P56747 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
CLDN6P56747 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.81□□□□□ -0.04
CLDN6P56747 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN6P56747 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN6P56747 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN6P56747 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.81□□□□□ -0.04
CLDN6P56747 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLDN6P56747 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
CLDN6P56747 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CLDN6P56747 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN6P56747 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN6P56747 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN6P56747 TPM3P8-201ENST00000330554 643 ntBASIC14.81□□□□□ -0.04
CLDN6P56747 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLDN6P56747 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLDN6P56747 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN6P56747 AL133267.1-201ENST00000398220 340 ntBASIC14.81□□□□□ -0.04
CLDN6P56747 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN6P56747 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN6P56747 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN6P56747 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN6P56747 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN6P56747 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN6P56747 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN6P56747 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN6P56747 MIR4722-201ENST00000578292 60 ntBASIC14.81□□□□□ -0.04
CLDN6P56747 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN6P56747 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLDN6P56747 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN6P56747 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN6P56747 AC128714.1-201ENST00000637035 887 ntBASIC14.81□□□□□ -0.04
CLDN6P56747 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN6P56747 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLDN6P56747 AC092364.2-201ENST00000596710 2692 ntBASIC14.81□□□□□ -0.04
CLDN6P56747 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLDN6P56747 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN6P56747 AC006449.5-201ENST00000610658 2098 ntBASIC14.81□□□□□ -0.04
CLDN6P56747 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN6P56747 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN6P56747 KRT8P19-201ENST00000551916 1455 ntBASIC14.81□□□□□ -0.04
CLDN6P56747 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN6P56747 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN6P56747 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN6P56747 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN6P56747 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CLDN6P56747 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN6P56747 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN6P56747 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN6P56747 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN6P56747 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.8□□□□□ -0.04
CLDN6P56747 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN6P56747 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN6P56747 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms