Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.64■□□□□ 0.09
WNT3AP56704 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.64■□□□□ 0.09
WNT3AP56704 AL096865.1-201ENST00000606796 927 ntBASIC15.64■□□□□ 0.09
WNT3AP56704 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.64■□□□□ 0.09
WNT3AP56704 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
WNT3AP56704 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
WNT3AP56704 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.64■□□□□ 0.09
WNT3AP56704 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
WNT3AP56704 FLJ16779-201ENST00000612722 7638 ntBASIC15.64■□□□□ 0.09
WNT3AP56704 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
WNT3AP56704 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
WNT3AP56704 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
WNT3AP56704 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
WNT3AP56704 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
WNT3AP56704 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
WNT3AP56704 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
WNT3AP56704 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.63■□□□□ 0.09
WNT3AP56704 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
WNT3AP56704 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.63■□□□□ 0.09
WNT3AP56704 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.63■□□□□ 0.09
WNT3AP56704 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
WNT3AP56704 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
WNT3AP56704 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.63■□□□□ 0.09
WNT3AP56704 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
WNT3AP56704 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
WNT3AP56704 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
WNT3AP56704 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
WNT3AP56704 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.63■□□□□ 0.09
WNT3AP56704 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
WNT3AP56704 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
WNT3AP56704 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
WNT3AP56704 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
WNT3AP56704 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
WNT3AP56704 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.63■□□□□ 0.09
WNT3AP56704 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.63■□□□□ 0.09
WNT3AP56704 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
WNT3AP56704 AC093004.1-201ENST00000508850 424 ntBASIC15.63■□□□□ 0.09
WNT3AP56704 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.63■□□□□ 0.09
WNT3AP56704 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.63■□□□□ 0.09
WNT3AP56704 SPCS2P1-201ENST00000561636 679 ntBASIC15.63■□□□□ 0.09
WNT3AP56704 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
WNT3AP56704 AL355385.1-201ENST00000606123 409 ntBASIC15.63■□□□□ 0.09
WNT3AP56704 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.63■□□□□ 0.09
WNT3AP56704 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.63■□□□□ 0.09
WNT3AP56704 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.63■□□□□ 0.09
WNT3AP56704 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
WNT3AP56704 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
WNT3AP56704 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
WNT3AP56704 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
WNT3AP56704 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.63■□□□□ 0.09
WNT3AP56704 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
WNT3AP56704 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.63■□□□□ 0.09
WNT3AP56704 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
WNT3AP56704 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
WNT3AP56704 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.63■□□□□ 0.09
WNT3AP56704 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
WNT3AP56704 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
WNT3AP56704 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.63■□□□□ 0.09
WNT3AP56704 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.62■□□□□ 0.09
WNT3AP56704 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
WNT3AP56704 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.62■□□□□ 0.09
WNT3AP56704 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.62■□□□□ 0.09
WNT3AP56704 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.62■□□□□ 0.09
WNT3AP56704 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 MIR661-201ENST00000384842 89 ntBASIC15.62■□□□□ 0.09
WNT3AP56704 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.62■□□□□ 0.09
WNT3AP56704 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.62■□□□□ 0.09
WNT3AP56704 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.62■□□□□ 0.09
WNT3AP56704 AC011467.4-201ENST00000594891 528 ntBASIC15.62■□□□□ 0.09
WNT3AP56704 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.62■□□□□ 0.09
WNT3AP56704 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.62■□□□□ 0.09
WNT3AP56704 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.62■□□□□ 0.09
WNT3AP56704 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
WNT3AP56704 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.62■□□□□ 0.09
WNT3AP56704 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
WNT3AP56704 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms