Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
EPHA4P54764 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA4P54764 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA4P54764 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
EPHA4P54764 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.89□□□□□ -0.03
EPHA4P54764 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA4P54764 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA4P54764 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA4P54764 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
EPHA4P54764 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EPHA4P54764 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
EPHA4P54764 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
EPHA4P54764 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
EPHA4P54764 AL136379.1-201ENST00000623471 2642 ntBASIC14.88□□□□□ -0.03
EPHA4P54764 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.88□□□□□ -0.03
EPHA4P54764 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
EPHA4P54764 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
EPHA4P54764 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.88□□□□□ -0.03
EPHA4P54764 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
EPHA4P54764 CNN2P8-201ENST00000421872 913 ntBASIC14.88□□□□□ -0.03
EPHA4P54764 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
EPHA4P54764 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.88□□□□□ -0.03
EPHA4P54764 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.88□□□□□ -0.03
EPHA4P54764 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.88□□□□□ -0.03
EPHA4P54764 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.88□□□□□ -0.03
EPHA4P54764 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
EPHA4P54764 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.88□□□□□ -0.03
EPHA4P54764 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.88□□□□□ -0.03
EPHA4P54764 AC244669.2-201ENST00000612320 853 ntBASIC14.88□□□□□ -0.03
EPHA4P54764 AC132938.4-201ENST00000623835 848 ntBASIC14.88□□□□□ -0.03
EPHA4P54764 PRSS30P-206ENST00000641773 873 ntBASIC14.88□□□□□ -0.03
EPHA4P54764 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
EPHA4P54764 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
EPHA4P54764 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.88□□□□□ -0.03
EPHA4P54764 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.88□□□□□ -0.03
EPHA4P54764 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.88□□□□□ -0.03
EPHA4P54764 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA4P54764 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.87□□□□□ -0.03
EPHA4P54764 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA4P54764 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA4P54764 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.87□□□□□ -0.03
EPHA4P54764 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.87□□□□□ -0.03
EPHA4P54764 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.87□□□□□ -0.03
EPHA4P54764 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.87□□□□□ -0.03
EPHA4P54764 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA4P54764 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
EPHA4P54764 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA4P54764 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA4P54764 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
EPHA4P54764 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA4P54764 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA4P54764 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA4P54764 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA4P54764 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA4P54764 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA4P54764 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA4P54764 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA4P54764 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA4P54764 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.87□□□□□ -0.03
EPHA4P54764 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA4P54764 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA4P54764 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
EPHA4P54764 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA4P54764 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.87□□□□□ -0.03
EPHA4P54764 KLF2P2-201ENST00000416807 1039 ntBASIC14.87□□□□□ -0.03
EPHA4P54764 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
EPHA4P54764 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.87□□□□□ -0.03
EPHA4P54764 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.87□□□□□ -0.03
EPHA4P54764 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.87□□□□□ -0.03
EPHA4P54764 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.87□□□□□ -0.03
EPHA4P54764 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.87□□□□□ -0.03
EPHA4P54764 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms