Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.43■□□□□ 0.38
EPHB4P54760 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.43■□□□□ 0.38
EPHB4P54760 AL031731.1-201ENST00000642131 2094 ntBASIC17.43■□□□□ 0.38
EPHB4P54760 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
EPHB4P54760 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.43■□□□□ 0.38
EPHB4P54760 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.43■□□□□ 0.38
EPHB4P54760 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.43■□□□□ 0.38
EPHB4P54760 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.43■□□□□ 0.38
EPHB4P54760 AP001258.2-201ENST00000529891 490 ntBASIC17.43■□□□□ 0.38
EPHB4P54760 KRT90P-201ENST00000549264 1064 ntBASIC17.43■□□□□ 0.38
EPHB4P54760 ACTG1P17-201ENST00000558391 1119 ntBASIC17.43■□□□□ 0.38
EPHB4P54760 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.43■□□□□ 0.38
EPHB4P54760 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
EPHB4P54760 AL049840.4-201ENST00000602422 811 ntBASIC17.43■□□□□ 0.38
EPHB4P54760 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.43■□□□□ 0.38
EPHB4P54760 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.43■□□□□ 0.38
EPHB4P54760 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.43■□□□□ 0.38
EPHB4P54760 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
EPHB4P54760 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
EPHB4P54760 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
EPHB4P54760 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.43■□□□□ 0.38
EPHB4P54760 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
EPHB4P54760 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
EPHB4P54760 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EPHB4P54760 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
EPHB4P54760 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.42■□□□□ 0.38
EPHB4P54760 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
EPHB4P54760 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EPHB4P54760 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EPHB4P54760 AL607033.1-201ENST00000623900 1599 ntBASIC17.42■□□□□ 0.38
EPHB4P54760 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
EPHB4P54760 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
EPHB4P54760 AC134915.1-201ENST00000426461 574 ntBASIC17.42■□□□□ 0.38
EPHB4P54760 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.42■□□□□ 0.38
EPHB4P54760 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.42■□□□□ 0.38
EPHB4P54760 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.42■□□□□ 0.38
EPHB4P54760 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.42■□□□□ 0.38
EPHB4P54760 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.42■□□□□ 0.38
EPHB4P54760 AL365330.1-201ENST00000607459 531 ntBASIC17.42■□□□□ 0.38
EPHB4P54760 AL022328.3-201ENST00000607943 679 ntBASIC17.42■□□□□ 0.38
EPHB4P54760 RHOXF1P1-202ENST00000635473 501 ntBASIC17.42■□□□□ 0.38
EPHB4P54760 AC008687.7-202ENST00000637404 953 ntBASIC17.42■□□□□ 0.38
EPHB4P54760 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
EPHB4P54760 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.42■□□□□ 0.38
EPHB4P54760 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.42■□□□□ 0.38
EPHB4P54760 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
EPHB4P54760 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHB4P54760 INTS4P2-202ENST00000614726 2019 ntBASIC17.42■□□□□ 0.38
EPHB4P54760 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.42■□□□□ 0.38
EPHB4P54760 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.41■□□□□ 0.38
EPHB4P54760 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.41■□□□□ 0.38
EPHB4P54760 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
EPHB4P54760 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
EPHB4P54760 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.41■□□□□ 0.38
EPHB4P54760 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.41■□□□□ 0.38
EPHB4P54760 TNRC18P2-201ENST00000417666 2714 ntBASIC17.41■□□□□ 0.38
EPHB4P54760 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms