Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PDX1P52945 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.05■□□□□ -0
PDX1P52945 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.05■□□□□ -0
PDX1P52945 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDX1P52945 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.05■□□□□ -0
PDX1P52945 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDX1P52945 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDX1P52945 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PDX1P52945 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.05■□□□□ -0
PDX1P52945 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDX1P52945 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDX1P52945 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PDX1P52945 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDX1P52945 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
PDX1P52945 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.04■□□□□ -0
PDX1P52945 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.04■□□□□ -0
PDX1P52945 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PDX1P52945 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.04■□□□□ -0
PDX1P52945 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PDX1P52945 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.04■□□□□ -0
PDX1P52945 AC026954.1-201ENST00000429771 1293 ntBASIC15.04■□□□□ -0
PDX1P52945 AC245100.3-201ENST00000441281 285 ntBASIC15.04■□□□□ -0
PDX1P52945 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.04■□□□□ -0
PDX1P52945 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.04■□□□□ -0
PDX1P52945 KRT18P43-201ENST00000469825 1281 ntBASIC15.04■□□□□ -0
PDX1P52945 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.04■□□□□ -0
PDX1P52945 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.04■□□□□ -0
PDX1P52945 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.04■□□□□ -0
PDX1P52945 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.04■□□□□ -0
PDX1P52945 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.04■□□□□ -0
PDX1P52945 AC009542.2-202ENST00000619004 1067 ntBASIC15.04■□□□□ -0
PDX1P52945 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PDX1P52945 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.04■□□□□ -0
PDX1P52945 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.04■□□□□ -0
PDX1P52945 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDX1P52945 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PDX1P52945 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.03■□□□□ -0
PDX1P52945 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.03■□□□□ -0
PDX1P52945 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
PDX1P52945 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PDX1P52945 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.03■□□□□ -0
PDX1P52945 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.03■□□□□ -0
PDX1P52945 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PDX1P52945 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.03■□□□□ -0
PDX1P52945 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.03■□□□□ -0
PDX1P52945 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.03■□□□□ -0
PDX1P52945 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PDX1P52945 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.03■□□□□ -0
PDX1P52945 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.03■□□□□ -0
PDX1P52945 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
PDX1P52945 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.03■□□□□ -0
PDX1P52945 AC099548.2-209ENST00000480264 625 ntBASIC15.03■□□□□ -0
PDX1P52945 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PDX1P52945 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.03■□□□□ -0
PDX1P52945 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 AC244093.1-201ENST00000610837 814 ntBASIC15.03■□□□□ -0
PDX1P52945 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.03■□□□□ -0
PDX1P52945 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.03■□□□□ -0
PDX1P52945 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
PDX1P52945 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms