Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SLC1A6P48664 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A6P48664 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SLC1A6P48664 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A6P48664 AC097359.2-201ENST00000604992 2389 ntBASIC15.27■□□□□ 0.04
SLC1A6P48664 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A6P48664 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SLC1A6P48664 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A6P48664 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC1A6P48664 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A6P48664 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A6P48664 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A6P48664 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
SLC1A6P48664 HLA-A-201ENST00000376802 1334 ntBASIC15.27■□□□□ 0.04
SLC1A6P48664 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A6P48664 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A6P48664 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SLC1A6P48664 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SLC1A6P48664 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A6P48664 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A6P48664 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC1A6P48664 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC1A6P48664 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC1A6P48664 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A6P48664 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A6P48664 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC1A6P48664 AC091812.2-201ENST00000619081 385 ntBASIC15.27■□□□□ 0.04
SLC1A6P48664 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A6P48664 AC006504.5-208ENST00000588784 2401 ntBASIC15.27■□□□□ 0.03
SLC1A6P48664 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
SLC1A6P48664 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC1A6P48664 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A6P48664 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
SLC1A6P48664 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SLC1A6P48664 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SLC1A6P48664 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A6P48664 AP3S2-216ENST00000617003 1561 ntBASIC15.27■□□□□ 0.03
SLC1A6P48664 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SLC1A6P48664 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.27■□□□□ 0.03
SLC1A6P48664 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.27■□□□□ 0.03
SLC1A6P48664 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.27■□□□□ 0.03
SLC1A6P48664 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A6P48664 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SLC1A6P48664 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
SLC1A6P48664 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A6P48664 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
SLC1A6P48664 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A6P48664 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A6P48664 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC1A6P48664 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
SLC1A6P48664 AC027601.5-201ENST00000624065 2482 ntBASIC15.26■□□□□ 0.03
SLC1A6P48664 AC018529.2-202ENST00000611482 3087 ntBASIC15.26■□□□□ 0.03
SLC1A6P48664 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A6P48664 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A6P48664 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC1A6P48664 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A6P48664 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A6P48664 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A6P48664 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A6P48664 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC1A6P48664 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A6P48664 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLC1A6P48664 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A6P48664 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A6P48664 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A6P48664 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.26■□□□□ 0.03
SLC1A6P48664 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A6P48664 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.26■□□□□ 0.03
SLC1A6P48664 SPCS2P4-201ENST00000436160 681 ntBASIC15.26■□□□□ 0.03
SLC1A6P48664 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC1A6P48664 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC1A6P48664 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A6P48664 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC1A6P48664 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC1A6P48664 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC1A6P48664 LINC01225-203ENST00000563550 1244 ntBASIC15.26■□□□□ 0.03
SLC1A6P48664 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC1A6P48664 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A6P48664 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SLC1A6P48664 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A6P48664 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A6P48664 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A6P48664 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A6P48664 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A6P48664 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC1A6P48664 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A6P48664 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A6P48664 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A6P48664 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A6P48664 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A6P48664 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC1A6P48664 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A6P48664 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SLC1A6P48664 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC1A6P48664 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC1A6P48664 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC1A6P48664 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms