Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.01□□□□□ -0.17
APOBEC1P41238 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
APOBEC1P41238 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
APOBEC1P41238 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
APOBEC1P41238 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBEC1P41238 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.01□□□□□ -0.17
APOBEC1P41238 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
APOBEC1P41238 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
APOBEC1P41238 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOBEC1P41238 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
APOBEC1P41238 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOBEC1P41238 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
APOBEC1P41238 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
APOBEC1P41238 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
APOBEC1P41238 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
APOBEC1P41238 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
APOBEC1P41238 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOBEC1P41238 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
APOBEC1P41238 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOBEC1P41238 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOBEC1P41238 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOBEC1P41238 WASH3P-207ENST00000560956 1394 ntBASIC14□□□□□ -0.17
APOBEC1P41238 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
APOBEC1P41238 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOBEC1P41238 CICP11-201ENST00000434745 2827 ntBASIC14□□□□□ -0.17
APOBEC1P41238 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOBEC1P41238 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14□□□□□ -0.17
APOBEC1P41238 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14□□□□□ -0.17
APOBEC1P41238 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOBEC1P41238 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14□□□□□ -0.17
APOBEC1P41238 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14□□□□□ -0.17
APOBEC1P41238 RN7SL204P-201ENST00000582831 262 ntBASIC14□□□□□ -0.17
APOBEC1P41238 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14□□□□□ -0.17
APOBEC1P41238 AC093726.1-201ENST00000608064 963 ntBASIC14□□□□□ -0.17
APOBEC1P41238 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOBEC1P41238 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
APOBEC1P41238 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
APOBEC1P41238 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOBEC1P41238 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14□□□□□ -0.17
APOBEC1P41238 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14□□□□□ -0.17
APOBEC1P41238 MROH4P-201ENST00000431302 1578 ntBASIC14□□□□□ -0.17
APOBEC1P41238 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
APOBEC1P41238 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
APOBEC1P41238 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOBEC1P41238 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.99□□□□□ -0.17
APOBEC1P41238 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.99□□□□□ -0.17
APOBEC1P41238 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 MIR600HG-201ENST00000449175 5984 ntBASIC13.99□□□□□ -0.17
APOBEC1P41238 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 AC006058.4-201ENST00000624016 1670 ntBASIC13.99□□□□□ -0.17
APOBEC1P41238 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
APOBEC1P41238 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.99□□□□□ -0.17
APOBEC1P41238 AC104457.1-201ENST00000401024 814 ntBASIC13.99□□□□□ -0.17
APOBEC1P41238 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.99□□□□□ -0.17
APOBEC1P41238 AC002472.2-201ENST00000442739 958 ntBASIC13.99□□□□□ -0.17
APOBEC1P41238 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.99□□□□□ -0.17
APOBEC1P41238 GAPDHP40-201ENST00000505218 1006 ntBASIC13.99□□□□□ -0.17
APOBEC1P41238 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.99□□□□□ -0.17
APOBEC1P41238 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.99□□□□□ -0.17
APOBEC1P41238 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.99□□□□□ -0.17
APOBEC1P41238 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.99□□□□□ -0.17
APOBEC1P41238 AL132655.2-201ENST00000596276 594 ntBASIC13.99□□□□□ -0.17
APOBEC1P41238 AL049840.4-201ENST00000602422 811 ntBASIC13.99□□□□□ -0.17
APOBEC1P41238 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.99□□□□□ -0.17
APOBEC1P41238 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
APOBEC1P41238 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.99□□□□□ -0.17
APOBEC1P41238 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.99□□□□□ -0.17
APOBEC1P41238 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
APOBEC1P41238 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.99□□□□□ -0.17
APOBEC1P41238 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 AL136379.1-201ENST00000623471 2642 ntBASIC13.99□□□□□ -0.17
APOBEC1P41238 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.99□□□□□ -0.17
APOBEC1P41238 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.99□□□□□ -0.17
APOBEC1P41238 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.99□□□□□ -0.17
APOBEC1P41238 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.99□□□□□ -0.17
APOBEC1P41238 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOBEC1P41238 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms