Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.63■□□□□ 0.41
COPB2P35606 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.63■□□□□ 0.41
COPB2P35606 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.63■□□□□ 0.41
COPB2P35606 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COPB2P35606 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 LINC02447-202ENST00000501888 2146 ntBASIC17.63■□□□□ 0.41
COPB2P35606 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.63■□□□□ 0.41
COPB2P35606 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.63■□□□□ 0.41
COPB2P35606 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COPB2P35606 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.63■□□□□ 0.41
COPB2P35606 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COPB2P35606 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.62■□□□□ 0.41
COPB2P35606 AC015818.8-201ENST00000587907 1519 ntBASIC17.62■□□□□ 0.41
COPB2P35606 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPB2P35606 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.62■□□□□ 0.41
COPB2P35606 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.62■□□□□ 0.41
COPB2P35606 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COPB2P35606 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPB2P35606 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
COPB2P35606 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.62■□□□□ 0.41
COPB2P35606 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPB2P35606 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
COPB2P35606 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.62■□□□□ 0.41
COPB2P35606 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPB2P35606 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.62■□□□□ 0.41
COPB2P35606 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.62■□□□□ 0.41
COPB2P35606 MTX1P1-201ENST00000440904 838 ntBASIC17.62■□□□□ 0.41
COPB2P35606 HOMER2P2-201ENST00000451621 847 ntBASIC17.62■□□□□ 0.41
COPB2P35606 AL591846.1-201ENST00000451736 433 ntBASIC17.62■□□□□ 0.41
COPB2P35606 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
COPB2P35606 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.62■□□□□ 0.41
COPB2P35606 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.62■□□□□ 0.41
COPB2P35606 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.62■□□□□ 0.41
COPB2P35606 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.62■□□□□ 0.41
COPB2P35606 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPB2P35606 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.62■□□□□ 0.41
COPB2P35606 AL118558.3-201ENST00000607414 1079 ntBASIC17.62■□□□□ 0.41
COPB2P35606 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.62■□□□□ 0.41
COPB2P35606 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.62■□□□□ 0.41
COPB2P35606 AL139099.5-201ENST00000635274 300 ntBASIC17.62■□□□□ 0.41
COPB2P35606 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.62■□□□□ 0.41
COPB2P35606 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.62■□□□□ 0.41
COPB2P35606 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.62■□□□□ 0.41
COPB2P35606 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.62■□□□□ 0.41
COPB2P35606 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPB2P35606 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.62■□□□□ 0.41
COPB2P35606 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
COPB2P35606 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.62■□□□□ 0.41
COPB2P35606 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPB2P35606 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPB2P35606 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
COPB2P35606 KRT8P14-201ENST00000414254 1442 ntBASIC17.62■□□□□ 0.41
COPB2P35606 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COPB2P35606 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COPB2P35606 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPB2P35606 AL354989.2-201ENST00000435838 1540 ntBASIC17.62■□□□□ 0.41
COPB2P35606 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COPB2P35606 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
COPB2P35606 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 AC024909.3-201ENST00000611513 2257 ntBASIC17.61■□□□□ 0.41
COPB2P35606 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
COPB2P35606 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.61■□□□□ 0.41
COPB2P35606 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
COPB2P35606 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.61■□□□□ 0.41
COPB2P35606 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
COPB2P35606 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.61■□□□□ 0.41
COPB2P35606 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.61■□□□□ 0.41
COPB2P35606 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
COPB2P35606 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.61■□□□□ 0.41
COPB2P35606 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
COPB2P35606 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms