Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SHC1P29353 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.26□□□□□ -0.13
SHC1P29353 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.26□□□□□ -0.13
SHC1P29353 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.26□□□□□ -0.13
SHC1P29353 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SHC1P29353 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 AC090616.6-203ENST00000579186 1945 ntBASIC14.25□□□□□ -0.13
SHC1P29353 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
SHC1P29353 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SHC1P29353 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.25□□□□□ -0.13
SHC1P29353 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SHC1P29353 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SHC1P29353 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.25□□□□□ -0.13
SHC1P29353 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.25□□□□□ -0.13
SHC1P29353 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SHC1P29353 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.25□□□□□ -0.13
SHC1P29353 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SHC1P29353 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.25□□□□□ -0.13
SHC1P29353 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.25□□□□□ -0.13
SHC1P29353 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SHC1P29353 AC104794.3-201ENST00000566840 1248 ntBASIC14.25□□□□□ -0.13
SHC1P29353 AC074044.1-201ENST00000609673 707 ntBASIC14.25□□□□□ -0.13
SHC1P29353 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SHC1P29353 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.25□□□□□ -0.13
SHC1P29353 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.25□□□□□ -0.13
SHC1P29353 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.25□□□□□ -0.13
SHC1P29353 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.25□□□□□ -0.13
SHC1P29353 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.25□□□□□ -0.13
SHC1P29353 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.25□□□□□ -0.13
SHC1P29353 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
SHC1P29353 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHC1P29353 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SHC1P29353 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHC1P29353 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHC1P29353 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHC1P29353 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.24□□□□□ -0.13
SHC1P29353 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHC1P29353 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHC1P29353 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.24□□□□□ -0.13
SHC1P29353 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SHC1P29353 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.24□□□□□ -0.13
SHC1P29353 AC105250.1-201ENST00000509378 2057 ntBASIC14.24□□□□□ -0.13
SHC1P29353 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.24□□□□□ -0.13
SHC1P29353 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.24□□□□□ -0.13
SHC1P29353 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHC1P29353 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SHC1P29353 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SHC1P29353 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHC1P29353 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SHC1P29353 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SHC1P29353 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHC1P29353 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.24□□□□□ -0.13
SHC1P29353 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.24□□□□□ -0.13
SHC1P29353 AC114501.2-201ENST00000439631 535 ntBASIC14.24□□□□□ -0.13
SHC1P29353 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.24□□□□□ -0.13
SHC1P29353 TSPY16P-201ENST00000449843 468 ntBASIC14.24□□□□□ -0.13
SHC1P29353 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHC1P29353 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.24□□□□□ -0.13
SHC1P29353 SERBP1P5-201ENST00000510079 1181 ntBASIC14.24□□□□□ -0.13
SHC1P29353 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.24□□□□□ -0.13
SHC1P29353 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.24□□□□□ -0.13
SHC1P29353 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.24□□□□□ -0.13
SHC1P29353 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SHC1P29353 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHC1P29353 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SHC1P29353 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SHC1P29353 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHC1P29353 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SHC1P29353 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
SHC1P29353 CICP23-201ENST00000605013 2741 ntBASIC14.24□□□□□ -0.13
SHC1P29353 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHC1P29353 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SHC1P29353 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms