Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VARSP26640 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARSP26640 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.33■□□□□ 0.04
VARSP26640 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.33■□□□□ 0.04
VARSP26640 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.33■□□□□ 0.04
VARSP26640 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARSP26640 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VARSP26640 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARSP26640 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
VARSP26640 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.33■□□□□ 0.04
VARSP26640 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARSP26640 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.33■□□□□ 0.04
VARSP26640 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.33■□□□□ 0.04
VARSP26640 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.33■□□□□ 0.04
VARSP26640 CICP20-201ENST00000443330 2801 ntBASIC15.33■□□□□ 0.04
VARSP26640 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARSP26640 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARSP26640 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
VARSP26640 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARSP26640 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.33■□□□□ 0.04
VARSP26640 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
VARSP26640 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.32■□□□□ 0.04
VARSP26640 AL359183.1-201ENST00000623796 2132 ntBASIC15.32■□□□□ 0.04
VARSP26640 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
VARSP26640 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.32■□□□□ 0.04
VARSP26640 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
VARSP26640 AC005252.3-201ENST00000623855 2258 ntBASIC15.32■□□□□ 0.04
VARSP26640 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 AC007686.3-201ENST00000619017 3487 ntBASIC15.32■□□□□ 0.04
VARSP26640 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 AC007191.1-201ENST00000623179 2995 ntBASIC15.32■□□□□ 0.04
VARSP26640 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.32■□□□□ 0.04
VARSP26640 AC005840.4-201ENST00000541242 2494 ntBASIC15.32■□□□□ 0.04
VARSP26640 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
VARSP26640 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.32■□□□□ 0.04
VARSP26640 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
VARSP26640 AC241585.1-201ENST00000433527 519 ntBASIC15.32■□□□□ 0.04
VARSP26640 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.32■□□□□ 0.04
VARSP26640 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.32■□□□□ 0.04
VARSP26640 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 CRB3P1-201ENST00000449338 276 ntBASIC15.32■□□□□ 0.04
VARSP26640 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.32■□□□□ 0.04
VARSP26640 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.32■□□□□ 0.04
VARSP26640 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.32■□□□□ 0.04
VARSP26640 HNRNPUP1-201ENST00000554987 333 ntBASIC15.32■□□□□ 0.04
VARSP26640 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.32■□□□□ 0.04
VARSP26640 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VARSP26640 AC106881.1-201ENST00000605849 3329 ntBASIC15.32■□□□□ 0.04
VARSP26640 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VARSP26640 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VARSP26640 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
VARSP26640 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.32■□□□□ 0.04
VARSP26640 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
VARSP26640 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.32■□□□□ 0.04
VARSP26640 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
VARSP26640 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARSP26640 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VARSP26640 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.31■□□□□ 0.04
VARSP26640 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 CETN4P-206ENST00000642099 2168 ntBASIC15.31■□□□□ 0.04
VARSP26640 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 AC068587.6-202ENST00000641839 5619 ntBASIC15.31■□□□□ 0.04
VARSP26640 AC009090.5-201ENST00000624886 2285 ntBASIC15.31■□□□□ 0.04
VARSP26640 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.31■□□□□ 0.04
VARSP26640 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.31■□□□□ 0.04
VARSP26640 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.31■□□□□ 0.04
VARSP26640 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VARSP26640 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.31■□□□□ 0.04
VARSP26640 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms