Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PTX3P26022 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
PTX3P26022 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 AL121723.1-201ENST00000445194 1519 ntBASIC14.89□□□□□ -0.03
PTX3P26022 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.89□□□□□ -0.03
PTX3P26022 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.89□□□□□ -0.03
PTX3P26022 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.89□□□□□ -0.03
PTX3P26022 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.89□□□□□ -0.03
PTX3P26022 AC092183.1-201ENST00000469884 875 ntBASIC14.89□□□□□ -0.03
PTX3P26022 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.89□□□□□ -0.03
PTX3P26022 AC009407.1-201ENST00000568958 598 ntBASIC14.89□□□□□ -0.03
PTX3P26022 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.89□□□□□ -0.03
PTX3P26022 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.89□□□□□ -0.03
PTX3P26022 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.89□□□□□ -0.03
PTX3P26022 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.89□□□□□ -0.03
PTX3P26022 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PTX3P26022 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.89□□□□□ -0.03
PTX3P26022 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.89□□□□□ -0.03
PTX3P26022 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.89□□□□□ -0.03
PTX3P26022 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.89□□□□□ -0.03
PTX3P26022 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.89□□□□□ -0.03
PTX3P26022 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
PTX3P26022 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTX3P26022 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PTX3P26022 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PTX3P26022 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PTX3P26022 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.88□□□□□ -0.03
PTX3P26022 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.88□□□□□ -0.03
PTX3P26022 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.88□□□□□ -0.03
PTX3P26022 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.88□□□□□ -0.03
PTX3P26022 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PTX3P26022 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PTX3P26022 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.88□□□□□ -0.03
PTX3P26022 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PTX3P26022 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.88□□□□□ -0.03
PTX3P26022 BASP1P1-201ENST00000430708 665 ntBASIC14.88□□□□□ -0.03
PTX3P26022 AC004890.2-204ENST00000481968 304 ntBASIC14.88□□□□□ -0.03
PTX3P26022 MEIS3P1-201ENST00000495167 958 ntBASIC14.88□□□□□ -0.03
PTX3P26022 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
PTX3P26022 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.88□□□□□ -0.03
PTX3P26022 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.88□□□□□ -0.03
PTX3P26022 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.88□□□□□ -0.03
PTX3P26022 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PTX3P26022 AC022144.1-201ENST00000602255 1580 ntBASIC14.88□□□□□ -0.03
PTX3P26022 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.88□□□□□ -0.03
PTX3P26022 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.88□□□□□ -0.03
PTX3P26022 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 LINC02228-204ENST00000642115 2962 ntBASIC14.88□□□□□ -0.03
PTX3P26022 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PTX3P26022 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTX3P26022 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PTX3P26022 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTX3P26022 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTX3P26022 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTX3P26022 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.87□□□□□ -0.03
PTX3P26022 AC007292.2-201ENST00000593524 1812 ntBASIC14.87□□□□□ -0.03
PTX3P26022 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTX3P26022 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTX3P26022 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms