Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 AP001282.1-201ENST00000531301 1499 ntBASIC15.69■□□□□ 0.1
CCND1P24385 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.69■□□□□ 0.1
CCND1P24385 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCND1P24385 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCND1P24385 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCND1P24385 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCND1P24385 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCND1P24385 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCND1P24385 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCND1P24385 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCND1P24385 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCND1P24385 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCND1P24385 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.68■□□□□ 0.1
CCND1P24385 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.68■□□□□ 0.1
CCND1P24385 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.68■□□□□ 0.1
CCND1P24385 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.68■□□□□ 0.1
CCND1P24385 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.68■□□□□ 0.1
CCND1P24385 AC140479.7-201ENST00000636301 2332 ntBASIC15.68■□□□□ 0.1
CCND1P24385 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCND1P24385 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCND1P24385 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
CCND1P24385 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.68■□□□□ 0.1
CCND1P24385 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CCND1P24385 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCND1P24385 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.68■□□□□ 0.1
CCND1P24385 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.68■□□□□ 0.1
CCND1P24385 AC023141.5-201ENST00000458585 616 ntBASIC15.68■□□□□ 0.1
CCND1P24385 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCND1P24385 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.68■□□□□ 0.1
CCND1P24385 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.68■□□□□ 0.1
CCND1P24385 SNHG9-202ENST00000564014 471 ntBASIC15.68■□□□□ 0.1
CCND1P24385 RARRES2P9-201ENST00000565168 469 ntBASIC15.68■□□□□ 0.1
CCND1P24385 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.68■□□□□ 0.1
CCND1P24385 AC026979.3-201ENST00000607315 403 ntBASIC15.68■□□□□ 0.1
CCND1P24385 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 AC009093.7-201ENST00000623853 1223 ntBASIC15.68■□□□□ 0.1
CCND1P24385 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.68■□□□□ 0.1
CCND1P24385 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.68■□□□□ 0.1
CCND1P24385 AC134684.3-201ENST00000641758 218 ntBASIC15.68■□□□□ 0.1
CCND1P24385 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.68■□□□□ 0.1
CCND1P24385 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.68■□□□□ 0.1
CCND1P24385 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
CCND1P24385 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CCND1P24385 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCND1P24385 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCND1P24385 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCND1P24385 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.67■□□□□ 0.1
CCND1P24385 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCND1P24385 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.67■□□□□ 0.1
CCND1P24385 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCND1P24385 AP3S2-216ENST00000617003 1561 ntBASIC15.67■□□□□ 0.1
CCND1P24385 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.67■□□□□ 0.1
CCND1P24385 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCND1P24385 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CCND1P24385 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCND1P24385 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CCND1P24385 CNN2P11-201ENST00000429351 262 ntBASIC15.67■□□□□ 0.1
CCND1P24385 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.67■□□□□ 0.1
CCND1P24385 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.67■□□□□ 0.1
CCND1P24385 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.67■□□□□ 0.1
CCND1P24385 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCND1P24385 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.67■□□□□ 0.1
CCND1P24385 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.67■□□□□ 0.1
CCND1P24385 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CCND1P24385 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
CCND1P24385 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCND1P24385 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.67■□□□□ 0.1
CCND1P24385 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCND1P24385 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CCND1P24385 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCND1P24385 AC136759.1-202ENST00000530858 2194 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms