Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
GAP43P17677 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
GAP43P17677 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.03■□□□□ 0.32
GAP43P17677 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.03■□□□□ 0.32
GAP43P17677 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
GAP43P17677 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.03■□□□□ 0.32
GAP43P17677 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.03■□□□□ 0.32
GAP43P17677 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
GAP43P17677 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
GAP43P17677 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 MYCLP2-201ENST00000449268 967 ntBASIC17.03■□□□□ 0.32
GAP43P17677 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.03■□□□□ 0.32
GAP43P17677 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.03■□□□□ 0.32
GAP43P17677 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.03■□□□□ 0.32
GAP43P17677 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.03■□□□□ 0.32
GAP43P17677 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.03■□□□□ 0.32
GAP43P17677 AC007431.3-201ENST00000623221 587 ntBASIC17.03■□□□□ 0.32
GAP43P17677 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.03■□□□□ 0.32
GAP43P17677 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.03■□□□□ 0.32
GAP43P17677 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
GAP43P17677 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 REXO1L4P-201ENST00000605109 1937 ntBASIC17.03■□□□□ 0.32
GAP43P17677 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 AC063926.3-201ENST00000624734 5658 ntBASIC17.03■□□□□ 0.32
GAP43P17677 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.03■□□□□ 0.32
GAP43P17677 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GAP43P17677 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.03■□□□□ 0.32
GAP43P17677 AC091951.1-201ENST00000512854 2465 ntBASIC17.03■□□□□ 0.32
GAP43P17677 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.02■□□□□ 0.32
GAP43P17677 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
GAP43P17677 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GAP43P17677 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GAP43P17677 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GAP43P17677 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.02■□□□□ 0.32
GAP43P17677 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.02■□□□□ 0.32
GAP43P17677 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.02■□□□□ 0.32
GAP43P17677 AC093525.8-201ENST00000624099 1342 ntBASIC17.02■□□□□ 0.32
GAP43P17677 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.02■□□□□ 0.32
GAP43P17677 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.02■□□□□ 0.32
GAP43P17677 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GAP43P17677 ZBED1P1-201ENST00000502364 1930 ntBASIC17.02■□□□□ 0.32
GAP43P17677 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.02■□□□□ 0.32
GAP43P17677 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GAP43P17677 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GAP43P17677 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
GAP43P17677 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GAP43P17677 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GAP43P17677 AGAP7P-201ENST00000582299 2062 ntBASIC17.02■□□□□ 0.32
GAP43P17677 AGAP14-201ENST00000624701 2060 ntBASIC17.02■□□□□ 0.32
GAP43P17677 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GAP43P17677 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GAP43P17677 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GAP43P17677 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GAP43P17677 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GAP43P17677 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.02■□□□□ 0.32
GAP43P17677 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.02■□□□□ 0.32
GAP43P17677 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GAP43P17677 AC098850.1-201ENST00000419919 790 ntBASIC17.02■□□□□ 0.32
GAP43P17677 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.02■□□□□ 0.32
GAP43P17677 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.02■□□□□ 0.32
GAP43P17677 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.02■□□□□ 0.32
GAP43P17677 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.02■□□□□ 0.32
GAP43P17677 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.02■□□□□ 0.32
GAP43P17677 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
GAP43P17677 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.02■□□□□ 0.32
GAP43P17677 AC140912.1-201ENST00000577171 1054 ntBASIC17.02■□□□□ 0.32
GAP43P17677 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GAP43P17677 AC092364.2-202ENST00000597012 1073 ntBASIC17.02■□□□□ 0.32
GAP43P17677 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.02■□□□□ 0.32
GAP43P17677 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.02■□□□□ 0.32
GAP43P17677 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.02■□□□□ 0.32
GAP43P17677 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GAP43P17677 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GAP43P17677 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GAP43P17677 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GAP43P17677 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GAP43P17677 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
GAP43P17677 AC007787.1-201ENST00000588095 1583 ntBASIC17.02■□□□□ 0.31
GAP43P17677 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
GAP43P17677 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GAP43P17677 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
GAP43P17677 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms