Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
HOXB3P14651 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HOXB3P14651 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.32■□□□□ 0.04
HOXB3P14651 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.32■□□□□ 0.04
HOXB3P14651 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HOXB3P14651 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HOXB3P14651 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HOXB3P14651 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.32■□□□□ 0.04
HOXB3P14651 HSFY4P-201ENST00000415994 1181 ntBASIC15.32■□□□□ 0.04
HOXB3P14651 AC074338.1-201ENST00000416825 156 ntBASIC15.32■□□□□ 0.04
HOXB3P14651 FAM21FP-201ENST00000426241 1131 ntBASIC15.32■□□□□ 0.04
HOXB3P14651 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.32■□□□□ 0.04
HOXB3P14651 AC005324.2-201ENST00000433051 415 ntTSL 5 BASIC15.32■□□□□ 0.04
HOXB3P14651 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.32■□□□□ 0.04
HOXB3P14651 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HOXB3P14651 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.32■□□□□ 0.04
HOXB3P14651 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HOXB3P14651 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.32■□□□□ 0.04
HOXB3P14651 LARP7P4-201ENST00000481075 878 ntBASIC15.32■□□□□ 0.04
HOXB3P14651 TRIM36-IT1-201ENST00000503723 881 ntBASIC15.32■□□□□ 0.04
HOXB3P14651 TMEM92-AS1-201ENST00000508851 750 ntTSL 3 BASIC15.32■□□□□ 0.04
HOXB3P14651 AC137794.1-201ENST00000509185 914 ntTSL 5 BASIC15.32■□□□□ 0.04
HOXB3P14651 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HOXB3P14651 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC15.32■□□□□ 0.04
HOXB3P14651 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC15.32■□□□□ 0.04
HOXB3P14651 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.32■□□□□ 0.04
HOXB3P14651 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HOXB3P14651 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.32■□□□□ 0.04
HOXB3P14651 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC15.32■□□□□ 0.04
HOXB3P14651 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.32■□□□□ 0.04
HOXB3P14651 RRP7BP-205ENST00000566851 833 ntBASIC15.32■□□□□ 0.04
HOXB3P14651 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC15.32■□□□□ 0.04
HOXB3P14651 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HOXB3P14651 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HOXB3P14651 HLA-C-210ENST00000640219 976 ntBASIC15.32■□□□□ 0.04
HOXB3P14651 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HOXB3P14651 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.32■□□□□ 0.04
HOXB3P14651 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.32■□□□□ 0.04
HOXB3P14651 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HOXB3P14651 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HOXB3P14651 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HOXB3P14651 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HOXB3P14651 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HOXB3P14651 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
HOXB3P14651 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.32■□□□□ 0.04
HOXB3P14651 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HOXB3P14651 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 LINC00554-201ENST00000564841 3011 ntBASIC15.31■□□□□ 0.04
HOXB3P14651 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HOXB3P14651 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HOXB3P14651 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.31■□□□□ 0.04
HOXB3P14651 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HOXB3P14651 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HOXB3P14651 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HOXB3P14651 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.31■□□□□ 0.04
HOXB3P14651 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 KRT43P-201ENST00000434019 910 ntBASIC15.31■□□□□ 0.04
HOXB3P14651 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.31■□□□□ 0.04
HOXB3P14651 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.31■□□□□ 0.04
HOXB3P14651 RPL13P2-201ENST00000440687 659 ntBASIC15.31■□□□□ 0.04
HOXB3P14651 TARDBPP1-201ENST00000442013 1203 ntBASIC15.31■□□□□ 0.04
HOXB3P14651 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.31■□□□□ 0.04
HOXB3P14651 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.31■□□□□ 0.04
HOXB3P14651 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.31■□□□□ 0.04
HOXB3P14651 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC15.31■□□□□ 0.04
HOXB3P14651 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC15.31■□□□□ 0.04
HOXB3P14651 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.31■□□□□ 0.04
HOXB3P14651 AC068408.1-201ENST00000577406 1144 ntBASIC15.31■□□□□ 0.04
HOXB3P14651 MIR4760-201ENST00000585040 80 ntBASIC15.31■□□□□ 0.04
HOXB3P14651 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
HOXB3P14651 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.31■□□□□ 0.04
HOXB3P14651 AC112187.3-201ENST00000607844 408 ntBASIC15.31■□□□□ 0.04
HOXB3P14651 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC15.31■□□□□ 0.04
HOXB3P14651 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC15.31■□□□□ 0.04
HOXB3P14651 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HOXB3P14651 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.31■□□□□ 0.04
HOXB3P14651 AL121929.2-201ENST00000609691 1432 ntBASIC15.31■□□□□ 0.04
HOXB3P14651 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC15.31■□□□□ 0.04
HOXB3P14651 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HOXB3P14651 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.31■□□□□ 0.04
HOXB3P14651 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXB3P14651 HYMAI-201ENST00000635591 3347 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms