Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC25.7■■□□□ 1.7
CFTRP13569 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CFTRP13569 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC25.7■■□□□ 1.7
CFTRP13569 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CFTRP13569 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC25.7■■□□□ 1.7
CFTRP13569 REEP5-205ENST00000504247 480 ntTSL 5 BASIC25.7■■□□□ 1.7
CFTRP13569 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC25.7■■□□□ 1.7
CFTRP13569 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC25.7■■□□□ 1.7
CFTRP13569 NEU3-207ENST00000534628 746 ntTSL 2 BASIC25.7■■□□□ 1.7
CFTRP13569 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CFTRP13569 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC25.7■■□□□ 1.7
CFTRP13569 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC25.7■■□□□ 1.7
CFTRP13569 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
CFTRP13569 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
CFTRP13569 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CFTRP13569 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC25.69■■□□□ 1.7
CFTRP13569 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CFTRP13569 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CFTRP13569 AL807761.2-201ENST00000422849 729 ntBASIC25.69■■□□□ 1.7
CFTRP13569 PSMD4P1-201ENST00000433951 1109 ntBASIC25.69■■□□□ 1.7
CFTRP13569 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC25.69■■□□□ 1.7
CFTRP13569 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC25.69■■□□□ 1.7
CFTRP13569 AP000911.2-201ENST00000534330 502 ntBASIC25.69■■□□□ 1.7
CFTRP13569 AC131206.1-201ENST00000538078 1211 ntBASIC25.69■■□□□ 1.7
CFTRP13569 AC087392.5-201ENST00000612517 489 ntBASIC25.69■■□□□ 1.7
CFTRP13569 AC244250.3-201ENST00000620749 366 ntBASIC25.69■■□□□ 1.7
CFTRP13569 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC25.69■■□□□ 1.7
CFTRP13569 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CFTRP13569 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
CFTRP13569 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC25.69■■□□□ 1.7
CFTRP13569 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC25.69■■□□□ 1.7
CFTRP13569 KRT18P9-201ENST00000604826 1300 ntBASIC25.69■■□□□ 1.7
CFTRP13569 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CFTRP13569 CA12-203ENST00000422263 2556 ntTSL 2 BASIC25.68■■□□□ 1.7
CFTRP13569 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CFTRP13569 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
CFTRP13569 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
CFTRP13569 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC25.68■■□□□ 1.7
CFTRP13569 OR2R1P-201ENST00000441404 914 ntBASIC25.68■■□□□ 1.7
CFTRP13569 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC25.68■■□□□ 1.7
CFTRP13569 NSD1-211ENST00000511258 809 ntTSL 3 BASIC25.68■■□□□ 1.7
CFTRP13569 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC25.68■■□□□ 1.7
CFTRP13569 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CFTRP13569 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
CFTRP13569 NUDT4P2-201ENST00000578341 546 ntBASIC25.68■■□□□ 1.7
CFTRP13569 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC25.68■■□□□ 1.7
CFTRP13569 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
CFTRP13569 AC138466.5-201ENST00000624002 808 ntBASIC25.68■■□□□ 1.7
CFTRP13569 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CFTRP13569 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CFTRP13569 AC092364.2-201ENST00000596710 2692 ntBASIC25.68■■□□□ 1.7
CFTRP13569 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CFTRP13569 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CFTRP13569 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CFTRP13569 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CFTRP13569 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CFTRP13569 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
CFTRP13569 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC25.68■■□□□ 1.7
CFTRP13569 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFTRP13569 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFTRP13569 FRMD6-AS1-201ENST00000617151 2229 ntBASIC25.67■■□□□ 1.7
CFTRP13569 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFTRP13569 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC25.67■■□□□ 1.7
CFTRP13569 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC25.67■■□□□ 1.7
CFTRP13569 C2orf69P1-201ENST00000563532 1093 ntBASIC25.67■■□□□ 1.7
CFTRP13569 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC25.67■■□□□ 1.7
CFTRP13569 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC25.67■■□□□ 1.7
CFTRP13569 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC25.67■■□□□ 1.7
CFTRP13569 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC25.67■■□□□ 1.7
CFTRP13569 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CFTRP13569 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFTRP13569 LINC01815-202ENST00000641468 1409 ntBASIC25.67■■□□□ 1.7
CFTRP13569 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC25.67■■□□□ 1.7
CFTRP13569 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CFTRP13569 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFTRP13569 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC25.67■■□□□ 1.7
CFTRP13569 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
CFTRP13569 PCDHA12-202ENST00000613593 2588 ntBASIC25.67■■□□□ 1.7
CFTRP13569 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFTRP13569 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFTRP13569 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CFTRP13569 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CFTRP13569 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFTRP13569 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CFTRP13569 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFTRP13569 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CFTRP13569 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFTRP13569 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFTRP13569 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFTRP13569 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC25.66■■□□□ 1.7
CFTRP13569 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CFTRP13569 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC25.66■■□□□ 1.7
CFTRP13569 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CFTRP13569 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC25.66■■□□□ 1.7
CFTRP13569 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC25.66■■□□□ 1.7
CFTRP13569 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC25.66■■□□□ 1.7
CFTRP13569 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CFTRP13569 VPS18-202ENST00000558474 873 ntTSL 3 BASIC25.66■■□□□ 1.7
CFTRP13569 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CFTRP13569 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms