Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.31□□□□□ -0.12
BMP4P12644 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
BMP4P12644 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
BMP4P12644 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 COL6A4P2-202ENST00000504443 2753 ntBASIC14.31□□□□□ -0.12
BMP4P12644 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
BMP4P12644 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 MIR770-201ENST00000390219 98 ntBASIC14.31□□□□□ -0.12
BMP4P12644 AC092474.2-201ENST00000424288 719 ntBASIC14.31□□□□□ -0.12
BMP4P12644 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.31□□□□□ -0.12
BMP4P12644 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.31□□□□□ -0.12
BMP4P12644 AL031055.1-201ENST00000606362 631 ntBASIC14.31□□□□□ -0.12
BMP4P12644 AC099522.2-201ENST00000607001 744 ntBASIC14.31□□□□□ -0.12
BMP4P12644 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
BMP4P12644 AC093028.1-201ENST00000622998 982 ntBASIC14.31□□□□□ -0.12
BMP4P12644 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
BMP4P12644 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
BMP4P12644 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
BMP4P12644 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
BMP4P12644 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
BMP4P12644 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.31□□□□□ -0.12
BMP4P12644 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.31□□□□□ -0.12
BMP4P12644 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
BMP4P12644 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
BMP4P12644 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.31□□□□□ -0.12
BMP4P12644 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.31□□□□□ -0.12
BMP4P12644 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.31□□□□□ -0.12
BMP4P12644 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.31□□□□□ -0.12
BMP4P12644 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BMP4P12644 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
BMP4P12644 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 SLC22A20-204ENST00000530038 1673 ntBASIC14.3□□□□□ -0.12
BMP4P12644 PCDHA3-202ENST00000532566 4594 ntBASIC14.3□□□□□ -0.12
BMP4P12644 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
BMP4P12644 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 DGCR9-201ENST00000609630 2415 ntBASIC14.3□□□□□ -0.12
BMP4P12644 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
BMP4P12644 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.3□□□□□ -0.12
BMP4P12644 SPDYE7P-202ENST00000420373 878 ntBASIC14.3□□□□□ -0.12
BMP4P12644 ADH5P3-201ENST00000433842 1137 ntBASIC14.3□□□□□ -0.12
BMP4P12644 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
BMP4P12644 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
BMP4P12644 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.3□□□□□ -0.12
BMP4P12644 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
BMP4P12644 BX640514.1-201ENST00000583223 1918 ntBASIC14.3□□□□□ -0.12
BMP4P12644 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
BMP4P12644 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.3□□□□□ -0.12
BMP4P12644 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
BMP4P12644 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
BMP4P12644 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.3□□□□□ -0.12
BMP4P12644 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.3□□□□□ -0.12
BMP4P12644 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.3□□□□□ -0.12
BMP4P12644 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BMP4P12644 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BMP4P12644 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BMP4P12644 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BMP4P12644 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BMP4P12644 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms