Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
COL11A1P12107 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 TMBIM7P-203ENST00000641617 1718 ntBASIC17.2■□□□□ 0.34
COL11A1P12107 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
COL11A1P12107 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL11A1P12107 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.19■□□□□ 0.34
COL11A1P12107 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
COL11A1P12107 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL11A1P12107 AC092506.1-202ENST00000401022 528 ntBASIC17.19■□□□□ 0.34
COL11A1P12107 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.19■□□□□ 0.34
COL11A1P12107 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.19■□□□□ 0.34
COL11A1P12107 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.19■□□□□ 0.34
COL11A1P12107 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.19■□□□□ 0.34
COL11A1P12107 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
COL11A1P12107 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL11A1P12107 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.19■□□□□ 0.34
COL11A1P12107 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
COL11A1P12107 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.19■□□□□ 0.34
COL11A1P12107 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
COL11A1P12107 AC006058.4-201ENST00000624016 1670 ntBASIC17.19■□□□□ 0.34
COL11A1P12107 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL11A1P12107 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL11A1P12107 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL11A1P12107 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
COL11A1P12107 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL11A1P12107 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL11A1P12107 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL11A1P12107 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.19■□□□□ 0.34
COL11A1P12107 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
COL11A1P12107 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.19■□□□□ 0.34
COL11A1P12107 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.19■□□□□ 0.34
COL11A1P12107 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL11A1P12107 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.19■□□□□ 0.34
COL11A1P12107 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
COL11A1P12107 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.19■□□□□ 0.34
COL11A1P12107 TLE1P1-201ENST00000422965 589 ntBASIC17.19■□□□□ 0.34
COL11A1P12107 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.19■□□□□ 0.34
COL11A1P12107 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.19■□□□□ 0.34
COL11A1P12107 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL11A1P12107 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL11A1P12107 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.19■□□□□ 0.34
COL11A1P12107 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.19■□□□□ 0.34
COL11A1P12107 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
COL11A1P12107 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.19■□□□□ 0.34
COL11A1P12107 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.19■□□□□ 0.34
COL11A1P12107 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL11A1P12107 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL11A1P12107 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL11A1P12107 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL11A1P12107 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL11A1P12107 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL11A1P12107 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL11A1P12107 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL11A1P12107 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
COL11A1P12107 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL11A1P12107 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL11A1P12107 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL11A1P12107 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL11A1P12107 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.18■□□□□ 0.34
COL11A1P12107 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
COL11A1P12107 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL11A1P12107 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
COL11A1P12107 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.18■□□□□ 0.34
COL11A1P12107 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.18■□□□□ 0.34
COL11A1P12107 AC134698.3-201ENST00000523880 214 ntBASIC17.18■□□□□ 0.34
COL11A1P12107 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.18■□□□□ 0.34
COL11A1P12107 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.18■□□□□ 0.34
COL11A1P12107 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.18■□□□□ 0.34
COL11A1P12107 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL11A1P12107 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL11A1P12107 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL11A1P12107 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.18■□□□□ 0.34
COL11A1P12107 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
COL11A1P12107 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.18■□□□□ 0.34
COL11A1P12107 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.17■□□□□ 0.34
COL11A1P12107 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL11A1P12107 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL11A1P12107 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
COL11A1P12107 LILRP1-201ENST00000444199 1370 ntBASIC17.17■□□□□ 0.34
COL11A1P12107 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL11A1P12107 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.17■□□□□ 0.34
COL11A1P12107 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.17■□□□□ 0.34
COL11A1P12107 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
COL11A1P12107 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL11A1P12107 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL11A1P12107 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.17■□□□□ 0.34
COL11A1P12107 VDAC1P1-201ENST00000439229 848 ntBASIC17.17■□□□□ 0.34
COL11A1P12107 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.17■□□□□ 0.34
COL11A1P12107 AC026434.2-201ENST00000506094 1078 ntBASIC17.17■□□□□ 0.34
COL11A1P12107 AC079328.1-201ENST00000560358 952 ntBASIC17.17■□□□□ 0.34
COL11A1P12107 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.17■□□□□ 0.34
COL11A1P12107 MBLAC2-202ENST00000514906 1936 ntBASIC17.17■□□□□ 0.34
COL11A1P12107 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms