Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.28■□□□□ 0.36
CYP3A4P08684 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 RN7SL48P-201ENST00000579283 293 ntBASIC17.28■□□□□ 0.36
CYP3A4P08684 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CYP3A4P08684 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CYP3A4P08684 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.28■□□□□ 0.36
CYP3A4P08684 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.28■□□□□ 0.36
CYP3A4P08684 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.28■□□□□ 0.36
CYP3A4P08684 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.28■□□□□ 0.36
CYP3A4P08684 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.28■□□□□ 0.36
CYP3A4P08684 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CYP3A4P08684 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CYP3A4P08684 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.28■□□□□ 0.36
CYP3A4P08684 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CYP3A4P08684 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.27■□□□□ 0.36
CYP3A4P08684 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.27■□□□□ 0.36
CYP3A4P08684 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CYP3A4P08684 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CYP3A4P08684 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CYP3A4P08684 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.27■□□□□ 0.36
CYP3A4P08684 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CYP3A4P08684 HYMAI-201ENST00000635591 3347 ntBASIC17.27■□□□□ 0.36
CYP3A4P08684 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CYP3A4P08684 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CYP3A4P08684 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CYP3A4P08684 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.27■□□□□ 0.36
CYP3A4P08684 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.27■□□□□ 0.36
CYP3A4P08684 C2orf27AP3-201ENST00000434123 579 ntBASIC17.27■□□□□ 0.36
CYP3A4P08684 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CYP3A4P08684 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
CYP3A4P08684 AC104989.1-201ENST00000519711 778 ntBASIC17.27■□□□□ 0.36
CYP3A4P08684 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.27■□□□□ 0.36
CYP3A4P08684 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.27■□□□□ 0.36
CYP3A4P08684 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.27■□□□□ 0.36
CYP3A4P08684 AP005482.1-201ENST00000563722 1273 ntBASIC17.27■□□□□ 0.36
CYP3A4P08684 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.27■□□□□ 0.36
CYP3A4P08684 MIR6805-201ENST00000615055 62 ntBASIC17.27■□□□□ 0.36
CYP3A4P08684 AL354718.3-201ENST00000616414 581 ntBASIC17.27■□□□□ 0.36
CYP3A4P08684 CR382287.1-201ENST00000623954 586 ntBASIC17.27■□□□□ 0.36
CYP3A4P08684 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.27■□□□□ 0.36
CYP3A4P08684 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.27■□□□□ 0.36
CYP3A4P08684 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CYP3A4P08684 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CYP3A4P08684 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CYP3A4P08684 AC092384.3-202ENST00000564646 2873 ntBASIC17.27■□□□□ 0.36
CYP3A4P08684 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CYP3A4P08684 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CYP3A4P08684 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.27■□□□□ 0.35
CYP3A4P08684 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CYP3A4P08684 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.27■□□□□ 0.35
CYP3A4P08684 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CYP3A4P08684 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CYP3A4P08684 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CYP3A4P08684 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CYP3A4P08684 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.27■□□□□ 0.35
CYP3A4P08684 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.27■□□□□ 0.35
CYP3A4P08684 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CYP3A4P08684 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CYP3A4P08684 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.26■□□□□ 0.35
CYP3A4P08684 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CYP3A4P08684 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CYP3A4P08684 AC073347.1-201ENST00000421633 2643 ntBASIC17.26■□□□□ 0.35
CYP3A4P08684 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CYP3A4P08684 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CYP3A4P08684 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CYP3A4P08684 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CYP3A4P08684 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
CYP3A4P08684 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.26■□□□□ 0.35
CYP3A4P08684 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CYP3A4P08684 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.26■□□□□ 0.35
CYP3A4P08684 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CYP3A4P08684 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CYP3A4P08684 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CYP3A4P08684 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CYP3A4P08684 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CYP3A4P08684 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CYP3A4P08684 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.26■□□□□ 0.35
CYP3A4P08684 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CYP3A4P08684 KLF2P4-201ENST00000451959 1225 ntBASIC17.26■□□□□ 0.35
CYP3A4P08684 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CYP3A4P08684 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.26■□□□□ 0.35
CYP3A4P08684 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CYP3A4P08684 MIR4259-201ENST00000584466 101 ntBASIC17.26■□□□□ 0.35
CYP3A4P08684 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms