Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL354989.2-201ENST00000435838 1540 ntBASIC18.15■□□□□ 0.5
HLA-DOAP06340 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HLA-DOAP06340 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DOAP06340 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
HLA-DOAP06340 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DOAP06340 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DOAP06340 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DOAP06340 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-DOAP06340 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
HLA-DOAP06340 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HLA-DOAP06340 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DOAP06340 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
HLA-DOAP06340 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DOAP06340 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DOAP06340 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DOAP06340 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DOAP06340 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DOAP06340 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-DOAP06340 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HLA-DOAP06340 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HLA-DOAP06340 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
HLA-DOAP06340 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DOAP06340 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOAP06340 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOAP06340 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOAP06340 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOAP06340 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
HLA-DOAP06340 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOAP06340 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.14■□□□□ 0.49
HLA-DOAP06340 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOAP06340 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DOAP06340 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOAP06340 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DOAP06340 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.14■□□□□ 0.49
HLA-DOAP06340 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.14■□□□□ 0.49
HLA-DOAP06340 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.14■□□□□ 0.49
HLA-DOAP06340 AC108725.1-201ENST00000495472 409 ntBASIC18.14■□□□□ 0.49
HLA-DOAP06340 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.14■□□□□ 0.49
HLA-DOAP06340 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.14■□□□□ 0.49
HLA-DOAP06340 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DOAP06340 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.14■□□□□ 0.49
HLA-DOAP06340 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC18.14■□□□□ 0.49
HLA-DOAP06340 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.14■□□□□ 0.49
HLA-DOAP06340 AC091271.1-201ENST00000611877 1162 ntBASIC18.14■□□□□ 0.49
HLA-DOAP06340 ENPP7P14-201ENST00000621765 1040 ntBASIC18.14■□□□□ 0.49
HLA-DOAP06340 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOAP06340 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
HLA-DOAP06340 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOAP06340 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DOAP06340 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOAP06340 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
HLA-DOAP06340 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.14■□□□□ 0.49
HLA-DOAP06340 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOAP06340 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOAP06340 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOAP06340 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOAP06340 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOAP06340 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DOAP06340 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOAP06340 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DOAP06340 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOAP06340 TNRC18P3-201ENST00000441896 2691 ntBASIC18.13■□□□□ 0.49
HLA-DOAP06340 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HLA-DOAP06340 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.13■□□□□ 0.49
HLA-DOAP06340 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HLA-DOAP06340 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HLA-DOAP06340 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOAP06340 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.13■□□□□ 0.49
HLA-DOAP06340 Z93015.1-201ENST00000451718 390 ntBASIC18.13■□□□□ 0.49
HLA-DOAP06340 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.13■□□□□ 0.49
HLA-DOAP06340 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOAP06340 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.13■□□□□ 0.49
HLA-DOAP06340 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOAP06340 AC022616.1-201ENST00000518688 554 ntBASIC18.13■□□□□ 0.49
HLA-DOAP06340 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOAP06340 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.13■□□□□ 0.49
HLA-DOAP06340 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
HLA-DOAP06340 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOAP06340 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOAP06340 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOAP06340 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DOAP06340 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DOAP06340 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOAP06340 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DOAP06340 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOAP06340 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DOAP06340 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DOAP06340 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOAP06340 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOAP06340 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DOAP06340 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HLA-DOAP06340 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DOAP06340 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.12■□□□□ 0.49
HLA-DOAP06340 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DOAP06340 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DOAP06340 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DOAP06340 AC026691.1-201ENST00000602502 2017 ntBASIC18.12■□□□□ 0.49
HLA-DOAP06340 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HLA-DOAP06340 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DOAP06340 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms